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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
ridA and spoT are separated by 134 nucleotides
spoT and rpoZ are separated by 127 nucleotides
rpoZ and OKGIIK_12110 are separated by 199 nucleotides
OKGIIK_12110 and OKGIIK_12115 are separated by 80 nucleotides
OKGIIK_12095: ridA - reactive intermediate/imine deaminase, at 2,607,337 to 2,607,720
ridA
OKGIIK_12100: spoT - guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, at 2,607,855 to 2,610,020
spoT
OKGIIK_12105: rpoZ - DNA-directed RNA polymerase subunit omega, at 2,610,148 to 2,610,438
rpoZ
OKGIIK_12110: OKGIIK_12110 - ABC transporter, at 2,610,638 to 2,611,468
_12110
OKGIIK_12115: OKGIIK_12115 - Sulfate transporter, at 2,611,549 to 2,611,857
_12115
Group
Condition
OKGIIK
_12095
OKGIIK
_12100
OKGIIK
_12105
OKGIIK
_12110
OKGIIK
_12115
ridA
spoT
rpoZ
stress
R2A_PIPES with Cobalt chloride 1024 uM
-1.7
N.D.
N.D.
-0.7
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
-1.4
N.D.
N.D.
-0.8
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.8
N.D.
N.D.
-0.5
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.8
N.D.
N.D.
-0.5
N.D.
no stress control
no stress control
-0.4
N.D.
N.D.
-0.6
N.D.
no stress control
no stress control
-0.3
N.D.
N.D.
-0.6
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.4
N.D.
N.D.
-0.4
N.D.
no stress control
no stress control
-0.3
N.D.
N.D.
-0.5
N.D.
no stress control
no stress control
-0.2
N.D.
N.D.
-0.6
N.D.
no stress control
no stress control
-0.4
N.D.
N.D.
-0.3
N.D.
no stress control
no stress control
-0.1
N.D.
N.D.
-0.6
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.3
N.D.
N.D.
-0.4
N.D.
no stress control
no stress control
-0.2
N.D.
N.D.
-0.5
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.6
N.D.
N.D.
-0.0
N.D.
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.1
N.D.
N.D.
-0.5
N.D.
no stress control
no stress control
-0.3
N.D.
N.D.
-0.3
N.D.
no stress control
no stress control
-0.0
N.D.
N.D.
-0.5
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
N.D.
N.D.
-0.4
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.2
N.D.
N.D.
-0.4
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.2
N.D.
N.D.
-0.3
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.5
N.D.
N.D.
+0.1
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.2
N.D.
N.D.
-0.3
N.D.
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.1
N.D.
N.D.
-0.3
N.D.
pH
R2A_PIPES pH 4.5
-0.2
N.D.
N.D.
+0.6
N.D.
pH
R2A_PIPES pH 4.5
+0.2
N.D.
N.D.
+0.5
N.D.
pH
R2A_PIPES pH 4.25
-0.3
N.D.
N.D.
+1.1
N.D.
pH
R2A_PIPES pH 4.25
-0.1
N.D.
N.D.
+0.9
N.D.
pH
R2A_PIPES pH 4
+0.1
N.D.
N.D.
+9.0
N.D.
pH
R2A_PIPES pH 4
+0.1
N.D.
N.D.
+9.4
N.D.
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