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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ycjD and citT are separated by 294 nucleotides
citT and wecC are separated by 101 nucleotides
wecC and OKGIIK_11920 are separated by 40 nucleotides
OKGIIK_11920 and OKGIIK_11925 are separated by 78 nucleotides
OKGIIK_11905: ycjD - Very-short-patch-repair endonuclease, at 2,563,286 to 2,563,633
ycjD
OKGIIK_11910: citT - Di- and tricarboxylate antiporter, at 2,563,928 to 2,565,769
citT
OKGIIK_11915: wecC - Vi polysaccharide biosynthesis protein VipA/TviB, at 2,565,871 to 2,567,139
wecC
OKGIIK_11920: OKGIIK_11920 - Ferredoxin, at 2,567,180 to 2,567,548
_11920
OKGIIK_11925: OKGIIK_11925 - hypothetical protein, at 2,567,627 to 2,567,902
_11925
Group
Condition
OKGIIK
_11905
OKGIIK
_11910
OKGIIK
_11915
OKGIIK
_11920
OKGIIK
_11925
ycjD
citT
wecC
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
-0.8
-0.0
-1.2
-0.3
N.D.
pH
R2A_HOMOPIPES; pH5
-0.7
-0.1
-0.6
-0.5
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-1.0
+0.1
-0.3
-0.3
N.D.
pH
R2A_HOMOPIPES; pH5
+0.0
+0.1
-1.0
-0.4
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.5
-0.1
-0.6
-0.1
N.D.
pH
R2A_MES; pH5
+0.2
+0.1
-1.0
-0.7
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.2
+0.1
-1.0
-0.2
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 5 mM
-0.1
-0.1
-0.8
-0.2
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.3
+0.0
-0.4
-0.6
N.D.
no nutrient control
NLDM_defined_nocarbon with D-Glucose
-0.7
+0.0
-0.3
-0.3
N.D.
pH
R2A_MES; pH5
+0.4
-0.1
-0.9
-0.6
N.D.
nutrient
NLDM_defined_nocarbon with D-Glucose and 20AA_mix 0.1X
-0.5
+0.2
-0.7
-0.1
N.D.
pH
R2A_HOMOPIPES; pH4.5
-0.3
+0.1
-0.6
-0.4
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
-0.2
+0.1
-0.7
-0.3
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.6
+0.2
-0.4
-0.2
N.D.
no stress control
no stress control
-0.6
+0.0
-0.3
-0.1
N.D.
no stress control
no stress control
-1.1
-0.0
+0.2
-0.0
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.2
+0.1
-0.6
-0.2
N.D.
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.7
+0.1
-0.2
-0.2
N.D.
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.3
+0.1
-0.1
-0.5
N.D.
pH
R2A_HOMOPIPES; pH4.25
-0.5
+0.3
-0.3
-0.4
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.3
+0.2
-0.3
-0.3
N.D.
nutrient
NLDM_defined_nocarbon with D-Glucose and 20AA_mix 0.1X
-0.2
-0.1
-0.5
+0.3
N.D.
stress
R2A_PIPES with Cobalt chloride 256 uM
+0.4
-0.0
-0.4
-0.4
N.D.
nutrient
NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM
+0.6
-0.1
-0.4
-0.4
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.7
+0.3
-0.0
+0.1
N.D.
stress
R2A_PIPES with Cadmium chloride 32 uM
+0.4
+0.2
-0.4
-0.2
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.3
+0.3
-0.3
-0.3
N.D.
stress
R2A_PIPES with Cobalt chloride 256 uM
+0.4
+0.1
-0.2
-0.3
N.D.
stress
R2A_PIPES with Cadmium chloride 32 uM
+0.4
+0.1
-0.5
+0.0
N.D.
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