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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
ompR and OKGIIK_11855 are separated by 324 nucleotides
OKGIIK_11855 and OKGIIK_11860 overlap by 1 nucleotides
OKGIIK_11860 and OKGIIK_11865 are separated by 57 nucleotides
OKGIIK_11865 and rimK are separated by 304 nucleotides
OKGIIK_11850: ompR - DNA-binding response regulator, at 2,553,222 to 2,553,908
ompR
OKGIIK_11855: OKGIIK_11855 - Protein TonB, at 2,554,233 to 2,555,969
_11855
OKGIIK_11860: OKGIIK_11860 - Transcriptional regulator, at 2,555,969 to 2,556,364
_11860
OKGIIK_11865: OKGIIK_11865 - hypothetical protein, at 2,556,422 to 2,556,907
_11865
OKGIIK_11870: rimK - 30S ribosomal protein S6--L-glutamate ligase, at 2,557,212 to 2,558,135
rimK
Group
Condition
OKGIIK
_11850
OKGIIK
_11855
OKGIIK
_11860
OKGIIK
_11865
OKGIIK
_11870
ompR
rimK
no stress control
no stress control
N.D.
-0.0
-0.0
+0.2
-1.4
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
-0.1
-0.1
+0.3
-0.9
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-0.1
-0.0
+0.1
-0.8
no stress control
no stress control
N.D.
+0.0
-0.1
+0.3
-0.8
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
-0.0
-0.3
+0.1
-0.5
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.0
-0.1
-0.1
-0.5
no stress control
no stress control
N.D.
+0.1
-0.1
+0.0
-0.5
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
+0.1
-0.2
+0.4
-0.7
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
+0.1
-0.0
+0.3
-0.7
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
+0.0
+0.1
+0.1
-0.7
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
-0.0
-0.0
+0.4
-0.8
no stress control
no stress control
N.D.
+0.1
-0.0
+0.4
-0.8
no stress control
no stress control
N.D.
+0.2
-0.0
-0.2
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.1
+0.1
+0.2
-0.6
no stress control
no stress control
N.D.
+0.1
-0.1
+0.3
-0.6
stress
R2A_PIPES with Nickel (II) chloride 424 uM
N.D.
+0.2
-0.1
+0.3
-0.7
no stress control
no stress control
N.D.
+0.0
+0.0
+0.5
-0.8
no stress control
no stress control
N.D.
+0.0
+0.0
+0.2
-0.4
pH
R2A_PIPES pH 4.5
N.D.
+0.0
+0.1
+0.1
-0.5
pH
R2A_PIPES pH 4
N.D.
-0.0
-0.1
+0.5
-0.5
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
-0.0
+0.1
+0.3
-0.4
pH
R2A_PIPES pH 4.5
N.D.
-0.0
+0.1
+0.1
-0.1
stress
R2A_PIPES with Cadmium chloride 128 uM
N.D.
+0.1
+0.0
+0.3
-0.3
pH
R2A_PIPES pH 4
N.D.
-0.0
+0.2
+0.2
-0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
-0.0
-0.0
+0.4
-0.2
pH
R2A_PIPES pH 4.25
N.D.
+0.1
-0.0
+0.3
-0.1
no stress control
no stress control
N.D.
+0.0
+0.0
+0.4
-0.3
pH
R2A_PIPES pH 4.25
N.D.
-0.2
+0.1
+0.4
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
+0.2
+0.2
+0.4
-0.3
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