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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_11835 and ilvE are separated by 53 nucleotides
ilvE and OKGIIK_11845 are separated by 276 nucleotides
OKGIIK_11845 and ompR overlap by 17 nucleotides
ompR and OKGIIK_11855 are separated by 324 nucleotides
OKGIIK_11835: OKGIIK_11835 - DUF4124 domain-containing protein, at 2,550,129 to 2,550,707
_11835
OKGIIK_11840: ilvE - branched-chain amino acid transaminase, at 2,550,761 to 2,551,678
ilvE
OKGIIK_11845: OKGIIK_11845 - Histidine kinase, at 2,551,955 to 2,553,238
_11845
OKGIIK_11850: ompR - DNA-binding response regulator, at 2,553,222 to 2,553,908
ompR
OKGIIK_11855: OKGIIK_11855 - Protein TonB, at 2,554,233 to 2,555,969
_11855
Group
Condition
OKGIIK
_11835
OKGIIK
_11840
OKGIIK
_11845
OKGIIK
_11850
OKGIIK
_11855
ilvE
ompR
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-0.0
-1.7
N.D.
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-0.1
-1.5
N.D.
+0.1
pH
R2A_PIPES pH 4
N.D.
-0.6
-0.5
N.D.
-0.0
pH
R2A_PIPES pH 4.25
N.D.
-0.0
-0.6
N.D.
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
-0.1
-0.6
N.D.
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
+0.1
-0.8
N.D.
-0.0
no stress control
no stress control
N.D.
+0.1
-0.7
N.D.
-0.0
pH
R2A_PIPES pH 4
N.D.
-0.2
-0.4
N.D.
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.2
-0.3
N.D.
-0.0
no stress control
no stress control
N.D.
-0.0
-0.5
N.D.
+0.0
no stress control
no stress control
N.D.
+0.0
-0.6
N.D.
+0.1
pH
R2A_PIPES pH 4.25
N.D.
+0.1
-0.7
N.D.
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.0
-0.5
N.D.
+0.1
no stress control
no stress control
N.D.
-0.1
-0.4
N.D.
+0.0
no stress control
no stress control
N.D.
+0.0
-0.5
N.D.
+0.0
no stress control
no stress control
N.D.
+0.0
-0.5
N.D.
+0.1
no stress control
no stress control
N.D.
-0.4
-0.2
N.D.
+0.2
no stress control
no stress control
N.D.
-0.1
-0.3
N.D.
+0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
-0.1
-0.2
N.D.
-0.0
no stress control
no stress control
N.D.
+0.1
-0.4
N.D.
+0.0
pH
R2A_PIPES pH 4.5
N.D.
-0.1
-0.2
N.D.
-0.0
pH
R2A_PIPES pH 4.5
N.D.
-0.1
-0.1
N.D.
+0.0
stress
R2A_PIPES with Cadmium chloride 128 uM
N.D.
+0.2
-0.4
N.D.
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
-0.1
+0.0
N.D.
-0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
+0.1
-0.1
N.D.
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
+0.1
-0.1
N.D.
+0.0
stress
R2A_PIPES with Nickel (II) chloride 424 uM
N.D.
+0.1
-0.2
N.D.
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
-0.1
+0.2
N.D.
+0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
+0.1
-0.0
N.D.
+0.2
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