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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
lptG and lptF overlap by 4 nucleotides
lptF and pepB are separated by 100 nucleotides
pepB and OKGIIK_11565 are separated by 94 nucleotides
OKGIIK_11565 and OKGIIK_11570 are separated by 1 nucleotides
OKGIIK_11550: lptG - LPS export ABC transporter permease LptG, at 2,479,947 to 2,481,047
lptG
OKGIIK_11555: lptF - LPS export ABC transporter permease LptF, at 2,481,044 to 2,482,159
lptF
OKGIIK_11560: pepB - leucyl aminopeptidase, at 2,482,260 to 2,483,750
pepB
OKGIIK_11565: OKGIIK_11565 - DNA polymerase III subunit chi, at 2,483,845 to 2,484,264
_11565
OKGIIK_11570: OKGIIK_11570 - Histidine kinase, at 2,484,266 to 2,487,859
_11570
Group
Condition
OKGIIK
_11550
OKGIIK
_11555
OKGIIK
_11560
OKGIIK
_11565
OKGIIK
_11570
lptG
lptF
pepB
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
-0.5
N.D.
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
-0.3
N.D.
-0.1
no stress control
no stress control
N.D.
N.D.
-0.4
N.D.
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
N.D.
-0.3
N.D.
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
N.D.
-0.2
N.D.
-0.1
pH
R2A_PIPES pH 4.5
N.D.
N.D.
-0.2
N.D.
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
N.D.
-0.2
N.D.
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
N.D.
-0.2
N.D.
-0.1
pH
R2A_PIPES pH 4.5
N.D.
N.D.
-0.3
N.D.
-0.0
no stress control
no stress control
N.D.
N.D.
-0.2
N.D.
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
N.D.
-0.2
N.D.
-0.1
no stress control
no stress control
N.D.
N.D.
-0.2
N.D.
-0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
N.D.
+0.0
N.D.
-0.2
no stress control
no stress control
N.D.
N.D.
-0.3
N.D.
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
N.D.
-0.1
N.D.
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
-0.1
N.D.
-0.0
no stress control
no stress control
N.D.
N.D.
-0.2
N.D.
+0.1
no stress control
no stress control
N.D.
N.D.
-0.1
N.D.
-0.0
no stress control
no stress control
N.D.
N.D.
-0.2
N.D.
+0.1
pH
R2A_PIPES pH 4.25
N.D.
N.D.
-0.1
N.D.
-0.0
no stress control
no stress control
N.D.
N.D.
-0.1
N.D.
-0.0
pH
R2A_PIPES pH 4
N.D.
N.D.
+0.0
N.D.
-0.1
pH
R2A_PIPES pH 4.25
N.D.
N.D.
-0.0
N.D.
-0.0
no stress control
no stress control
N.D.
N.D.
+0.0
N.D.
-0.1
pH
R2A_PIPES pH 4
N.D.
N.D.
+0.0
N.D.
-0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
N.D.
N.D.
-0.0
N.D.
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
+0.0
N.D.
+0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
N.D.
+0.2
N.D.
-0.1
stress
R2A_PIPES with Cadmium chloride 128 uM
N.D.
N.D.
+0.1
N.D.
+0.0
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