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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_11100 and baeS are separated by 459 nucleotides
baeS and ompR overlap by 11 nucleotides
ompR and fiu are separated by 190 nucleotides
fiu and OKGIIK_11120 are separated by 239 nucleotides
OKGIIK_11100: OKGIIK_11100 - hypothetical protein, at 2,378,973 to 2,380,757
_11100
OKGIIK_11105: baeS - sensor histidine kinase, at 2,381,217 to 2,382,485
baeS
OKGIIK_11110: ompR - DNA-binding response regulator, at 2,382,475 to 2,383,170
ompR
OKGIIK_11115: fiu - Outer membrane receptor for monomeric catechols, at 2,383,361 to 2,385,520
fiu
OKGIIK_11120: OKGIIK_11120 - TonB-dependent receptor, at 2,385,760 to 2,388,831
_11120
Group
Condition
OKGIIK
_11100
OKGIIK
_11105
OKGIIK
_11110
OKGIIK
_11115
OKGIIK
_11120
baeS
ompR
fiu
no stress control
no stress control
-0.0
-2.8
-2.9
-3.4
-0.1
no stress control
no stress control
+0.1
-3.6
-2.7
-2.9
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.0
-2.5
-2.1
-4.2
-0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.5
-2.7
-1.9
-3.5
+0.2
no stress control
no stress control
+0.1
-2.9
-2.5
-3.0
-0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.4
-2.9
-1.5
-3.7
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.3
-2.4
-2.1
-3.6
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.2
-3.1
-2.9
-2.4
+0.1
no stress control
no stress control
-0.0
-2.3
-1.9
-3.7
-0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.0
-2.8
-2.0
-3.2
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.2
-2.3
-2.7
-2.4
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-2.5
-2.9
-2.2
+0.4
no stress control
no stress control
+0.1
-3.7
-1.8
-1.6
-0.1
no stress control
no stress control
+0.2
-2.4
-2.2
-2.5
-0.1
no stress control
no stress control
+0.2
-3.0
-1.9
-2.1
+0.0
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.0
-3.0
-1.9
-1.4
+0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.0
-1.9
-1.9
-1.9
-0.0
no stress control
no stress control
+0.1
-2.1
-2.2
-1.6
+0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
-3.0
-1.1
-1.9
+0.1
no stress control
no stress control
+0.1
-2.4
-2.6
-0.9
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
-2.0
-1.9
-1.5
+0.4
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
-2.3
-1.5
-1.3
-0.1
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.2
-0.9
-0.7
-1.5
-0.0
pH
R2A_PIPES pH 4.25
+0.1
-1.3
-0.2
-0.9
-0.1
pH
R2A_PIPES pH 4
-0.2
-0.4
-0.4
-1.2
-0.2
pH
R2A_PIPES pH 4.5
+0.3
-0.8
-0.4
-1.1
-0.2
pH
R2A_PIPES pH 4.5
+0.3
-0.1
-0.8
-0.8
-0.2
pH
R2A_PIPES pH 4
-0.7
-0.4
+0.0
-0.2
-0.2
pH
R2A_PIPES pH 4.25
-0.2
-0.5
-0.3
-0.1
-0.1
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