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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_11050 and OKGIIK_11055 are separated by 89 nucleotides
OKGIIK_11055 and cheW are separated by 128 nucleotides
cheW and ompR overlap by 4 nucleotides
ompR and pilG are separated by 22 nucleotides
OKGIIK_11050: OKGIIK_11050 - Histidine kinase, at 2,365,161 to 2,371,100
_11050
OKGIIK_11055: OKGIIK_11055 - chemotaxis protein, at 2,371,190 to 2,373,220
_11055
OKGIIK_11060: cheW - chemotaxis protein CheW, at 2,373,349 to 2,373,888
cheW
OKGIIK_11065: ompR - two-component system response regulator, at 2,373,885 to 2,374,256
ompR
OKGIIK_11070: pilG - twitching motility response regulator PilG, at 2,374,279 to 2,374,677
pilG
Group
Condition
OKGIIK
_11050
OKGIIK
_11055
OKGIIK
_11060
OKGIIK
_11065
OKGIIK
_11070
cheW
ompR
pilG
stress
R2A_PIPES with Cobalt chloride 1024 uM
-1.5
-0.5
-0.3
-0.4
-0.7
no stress control
no stress control
-0.2
-0.2
-0.9
-1.7
-0.3
stress
R2A_PIPES with Cobalt chloride 1024 uM
-1.3
-0.3
-0.7
-0.7
-0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.7
-0.5
-0.4
-1.2
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.9
-0.3
+0.1
-0.7
-0.8
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.4
-0.4
+0.1
-1.1
-0.4
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.7
-0.1
-0.6
-0.6
-0.3
no stress control
no stress control
-0.3
-0.5
+0.4
-1.4
-0.4
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.6
-0.1
-0.0
-0.7
-0.6
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.8
-0.2
+0.1
-0.5
-0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.6
-0.2
-0.2
-0.0
-0.6
no stress control
no stress control
-0.2
-0.6
+0.1
-1.0
+0.0
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.3
-0.2
-0.5
-0.2
-0.3
no stress control
no stress control
-0.4
-0.5
-0.5
+0.3
-0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.4
-0.2
-0.2
-0.3
-0.1
no stress control
no stress control
-0.4
-0.5
-0.5
+0.2
-0.0
no stress control
no stress control
-0.2
-0.1
-0.1
-0.5
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.1
-0.4
-0.4
-0.4
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.4
-0.2
+0.3
-0.3
-0.4
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.2
-0.1
+0.2
-0.9
+0.2
no stress control
no stress control
-0.3
-0.2
-0.3
+0.3
-0.1
no stress control
no stress control
-0.1
-0.3
-0.2
+0.3
-0.4
no stress control
no stress control
-0.2
-0.6
+0.0
+1.1
-0.3
pH
R2A_PIPES pH 4.5
+0.3
+0.1
+0.4
-0.5
-0.0
pH
R2A_PIPES pH 4.5
+0.2
+0.2
+0.1
+0.7
-0.3
pH
R2A_PIPES pH 4.25
+0.5
+0.2
+0.2
+0.1
+0.2
pH
R2A_PIPES pH 4.25
+0.6
+0.3
+0.2
+0.8
+0.0
pH
R2A_PIPES pH 4
+1.4
+0.5
+0.9
-0.1
+0.1
pH
R2A_PIPES pH 4
+1.2
+0.3
+0.4
+0.8
+0.3
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