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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_11040 and OKGIIK_11045 overlap by 4 nucleotides
OKGIIK_11045 and OKGIIK_11050 overlap by 8 nucleotides
OKGIIK_11050 and OKGIIK_11055 are separated by 89 nucleotides
OKGIIK_11055 and cheW are separated by 128 nucleotides
OKGIIK_11040: OKGIIK_11040 - Chemotaxis protein CheW, at 2,363,034 to 2,363,543
_11040
OKGIIK_11045: OKGIIK_11045 - Chemotaxis protein CheB, at 2,363,540 to 2,365,168
_11045
OKGIIK_11050: OKGIIK_11050 - Histidine kinase, at 2,365,161 to 2,371,100
_11050
OKGIIK_11055: OKGIIK_11055 - chemotaxis protein, at 2,371,190 to 2,373,220
_11055
OKGIIK_11060: cheW - chemotaxis protein CheW, at 2,373,349 to 2,373,888
cheW
Group
Condition
OKGIIK
_11040
OKGIIK
_11045
OKGIIK
_11050
OKGIIK
_11055
OKGIIK
_11060
cheW
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
-0.0
-1.5
-0.5
-0.3
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
+0.1
-1.3
-0.3
-0.7
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
+0.1
-0.7
-0.5
-0.4
no stress control
no stress control
N.D.
+0.1
-0.4
-0.5
-0.5
no stress control
no stress control
N.D.
+0.1
-0.4
-0.5
-0.5
stress
R2A_PIPES with Cadmium chloride 128 uM
N.D.
-0.2
-0.3
-0.2
-0.5
no stress control
no stress control
N.D.
+0.2
-0.2
-0.2
-0.9
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.1
-0.9
-0.3
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
+0.3
-0.7
-0.1
-0.6
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.1
-0.6
-0.2
-0.2
no stress control
no stress control
N.D.
-0.1
-0.3
-0.2
-0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
+0.0
-0.8
-0.2
+0.1
no stress control
no stress control
N.D.
-0.1
-0.2
-0.6
+0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
N.D.
-0.0
-0.4
-0.4
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
+0.2
-0.4
-0.2
-0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
+0.4
-0.1
-0.4
-0.4
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
+0.2
-0.6
-0.1
-0.0
no stress control
no stress control
N.D.
+0.2
-0.1
-0.3
-0.2
no stress control
no stress control
N.D.
-0.1
-0.3
-0.5
+0.4
no stress control
no stress control
N.D.
+0.1
-0.2
-0.1
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
+0.0
-0.4
-0.2
+0.3
no stress control
no stress control
N.D.
+0.4
-0.2
-0.6
+0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
+0.1
-0.2
-0.1
+0.2
pH
R2A_PIPES pH 4.5
N.D.
+0.2
+0.2
+0.2
+0.1
pH
R2A_PIPES pH 4.5
N.D.
+0.2
+0.3
+0.1
+0.4
pH
R2A_PIPES pH 4.25
N.D.
+0.2
+0.5
+0.2
+0.2
pH
R2A_PIPES pH 4.25
N.D.
+0.2
+0.6
+0.3
+0.2
pH
R2A_PIPES pH 4
N.D.
+0.0
+1.2
+0.3
+0.4
pH
R2A_PIPES pH 4
N.D.
+0.1
+1.4
+0.5
+0.9
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