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Cofit
Protein
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Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
pTR2 and OKGIIK_10895 are separated by 64 nucleotides
OKGIIK_10895 and OKGIIK_10900 are separated by 58 nucleotides
OKGIIK_10900 and iaaA are separated by 108 nucleotides
iaaA and OKGIIK_10910 are separated by 99 nucleotides
OKGIIK_10890: pTR2 - MFS transporter, at 2,332,093 to 2,333,643
pTR2
OKGIIK_10895: OKGIIK_10895 - Histidine kinase, at 2,333,708 to 2,334,982
_10895
OKGIIK_10900: OKGIIK_10900 - two-component system response regulator, at 2,335,041 to 2,335,625
_10900
OKGIIK_10905: iaaA - isoaspartyl peptidase/L-asparaginase, at 2,335,734 to 2,336,735
iaaA
OKGIIK_10910: OKGIIK_10910 - Peptidase M56, at 2,336,835 to 2,338,385
_10910
Group
Condition
OKGIIK
_10890
OKGIIK
_10895
OKGIIK
_10900
OKGIIK
_10905
OKGIIK
_10910
pTR2
iaaA
pH
R2A_PIPES pH 4.5
+0.4
-1.5
N.D.
+0.0
+0.1
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.1
-0.2
N.D.
-0.1
-0.4
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.0
-0.4
N.D.
-0.3
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.2
-0.2
N.D.
-0.4
+0.0
pH
R2A_PIPES pH 4.25
+0.3
-1.1
N.D.
+0.0
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.1
-0.5
N.D.
-0.2
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.0
-0.1
N.D.
-0.2
-0.1
pH
R2A_PIPES pH 4
+0.6
-1.1
N.D.
-0.1
+0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.0
-0.1
N.D.
-0.4
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
+0.2
N.D.
-0.3
-0.0
pH
R2A_PIPES pH 4.25
+0.3
-0.7
N.D.
+0.1
+0.0
no stress control
no stress control
+0.1
-0.1
N.D.
-0.2
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
+0.1
N.D.
-0.3
+0.0
no stress control
no stress control
+0.1
-0.1
N.D.
-0.1
-0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.1
-0.4
N.D.
-0.1
+0.2
no stress control
no stress control
+0.1
-0.2
N.D.
+0.0
-0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.0
-0.0
N.D.
-0.1
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
+0.0
N.D.
-0.3
+0.2
no stress control
no stress control
+0.1
-0.1
N.D.
-0.1
+0.1
no stress control
no stress control
-0.0
-0.0
N.D.
+0.1
+0.0
no stress control
no stress control
+0.1
+0.1
N.D.
-0.1
+0.0
no stress control
no stress control
+0.0
+0.3
N.D.
-0.2
-0.0
no stress control
no stress control
+0.0
+0.1
N.D.
-0.0
+0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.2
-0.1
N.D.
+0.0
+0.3
pH
R2A_PIPES pH 4
+0.7
-0.4
N.D.
-0.1
+0.3
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.2
+0.4
N.D.
+0.1
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.2
+0.2
N.D.
+0.0
+0.2
no stress control
no stress control
+0.1
+0.3
N.D.
+0.1
+0.0
pH
R2A_PIPES pH 4.5
+0.4
+0.2
N.D.
+0.2
-0.1
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