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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
sufT and OKGIIK_10670 are separated by 220 nucleotides
OKGIIK_10670 and pntB are separated by 178 nucleotides
pntB and pntA overlap by 1 nucleotides
pntA and rpoE are separated by 54 nucleotides
OKGIIK_10665: sufT - putative Fe-S cluster assembly protein SufT, at 2,288,119 to 2,288,676
sufT
OKGIIK_10670: OKGIIK_10670 - hypothetical protein, at 2,288,897 to 2,289,328
_10670
OKGIIK_10675: pntB - NAD(P) transhydrogenase subunit beta, at 2,289,507 to 2,290,964
pntB
OKGIIK_10680: pntA - NAD(P)(+) transhydrogenase, at 2,290,964 to 2,291,269
pntA
OKGIIK_10685: rpoE - RNA polymerase sigma factor, at 2,291,324 to 2,292,004
rpoE
Group
Condition
OKGIIK
_10665
OKGIIK
_10670
OKGIIK
_10675
OKGIIK
_10680
OKGIIK
_10685
sufT
pntB
pntA
rpoE
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-0.4
-0.5
-0.2
-0.3
no stress control
no stress control
N.D.
-0.2
-0.0
-0.0
+0.2
no stress control
no stress control
N.D.
+0.1
+0.1
-0.3
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
-0.0
+0.0
-0.1
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
+0.0
+0.0
-0.3
+0.3
no stress control
no stress control
N.D.
+0.6
-0.3
-0.2
-0.0
no stress control
no stress control
N.D.
-0.3
-0.1
+0.5
+0.1
no stress control
no stress control
N.D.
-0.2
-0.0
+0.0
+0.3
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
+0.2
-0.2
-0.1
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
+0.2
-0.1
-0.1
+0.2
no stress control
no stress control
N.D.
+0.2
+0.0
+0.2
+0.2
stress
R2A_PIPES with Nickel (II) chloride 424 uM
N.D.
+0.5
-0.1
+0.2
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.1
+0.1
-0.0
+0.6
stress
R2A_PIPES with Cadmium chloride 128 uM
N.D.
+0.7
-0.0
-0.4
+0.5
pH
R2A_PIPES pH 4
N.D.
+0.8
+0.1
+0.3
-0.4
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
+0.3
-0.0
+0.1
+0.4
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
+0.5
+0.1
+0.2
+0.1
pH
R2A_PIPES pH 4
N.D.
+0.7
+0.2
+0.4
-0.5
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
+0.6
+0.2
-0.3
+0.3
no stress control
no stress control
N.D.
+0.6
+0.2
+0.1
+0.2
no stress control
no stress control
N.D.
+0.4
+0.1
+0.4
+0.2
no stress control
no stress control
N.D.
+0.4
-0.1
+0.5
+0.3
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
+1.1
+0.0
+0.1
-0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
+0.1
+0.3
+0.4
+0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+1.0
+0.2
-0.0
+0.5
pH
R2A_PIPES pH 4.25
N.D.
+0.3
+0.4
+0.0
+1.7
pH
R2A_PIPES pH 4.25
N.D.
+0.3
+0.2
+0.3
+1.6
pH
R2A_PIPES pH 4.5
N.D.
+0.9
+0.0
-0.1
+1.9
pH
R2A_PIPES pH 4.5
N.D.
+0.8
+0.0
+0.1
+1.9
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