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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_10315 and gatA are separated by 96 nucleotides
gatA and OKGIIK_10325 are separated by 7 nucleotides
OKGIIK_10325 and aroG2 are separated by 70 nucleotides
aroG2 and OKGIIK_10335 are separated by 29 nucleotides
OKGIIK_10315: OKGIIK_10315 - Cytochrome c4, at 2,228,187 to 2,228,945
_10315
OKGIIK_10320: gatA - amidase, at 2,229,042 to 2,230,655
gatA
OKGIIK_10325: OKGIIK_10325 - hypothetical protein, at 2,230,663 to 2,231,496
_10325
OKGIIK_10330: aroG2 - 3-deoxy-7-phosphoheptulonate synthase class II, at 2,231,567 to 2,232,946
aroG2
OKGIIK_10335: OKGIIK_10335 - disulfide bond formation protein B, at 2,232,976 to 2,233,479
_10335
Group
Condition
OKGIIK
_10315
OKGIIK
_10320
OKGIIK
_10325
OKGIIK
_10330
OKGIIK
_10335
gatA
aroG2
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.3
-0.2
+0.1
-0.4
N.D.
no stress control
no stress control
+0.0
-0.2
-0.1
-0.2
N.D.
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.3
-0.2
+0.1
-0.1
N.D.
no stress control
no stress control
-0.0
-0.3
+0.0
-0.2
N.D.
no stress control
no stress control
-0.2
-0.1
-0.2
-0.0
N.D.
pH
R2A_PIPES pH 4.5
-0.1
-0.1
+0.0
-0.2
N.D.
pH
R2A_PIPES pH 4.25
-0.0
-0.0
-0.0
-0.2
N.D.
pH
R2A_PIPES pH 4
-0.0
-0.1
-0.1
-0.1
N.D.
no stress control
no stress control
-0.0
-0.2
-0.0
-0.0
N.D.
pH
R2A_PIPES pH 4.25
+0.0
-0.0
-0.1
-0.1
N.D.
no stress control
no stress control
-0.0
-0.1
+0.0
-0.1
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.0
-0.2
+0.1
-0.1
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.0
-0.1
+0.0
-0.1
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.2
-0.0
+0.1
+0.0
N.D.
pH
R2A_PIPES pH 4
-0.1
-0.1
+0.0
+0.1
N.D.
no stress control
no stress control
+0.1
-0.1
+0.0
-0.1
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
-0.3
-0.0
+0.1
N.D.
no stress control
no stress control
+0.1
-0.1
-0.0
-0.1
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
+0.1
+0.1
-0.1
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.1
+0.1
+0.1
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.2
-0.3
+0.0
+0.1
N.D.
no stress control
no stress control
+0.1
-0.1
-0.2
+0.2
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
+0.0
-0.0
-0.1
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.2
-0.1
+0.1
-0.0
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.2
+0.1
-0.0
-0.1
N.D.
pH
R2A_PIPES pH 4.5
-0.2
+0.1
+0.3
-0.1
N.D.
no stress control
no stress control
-0.1
+0.2
+0.1
+0.0
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
+0.2
+0.1
-0.1
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.3
+0.1
+0.1
+0.2
N.D.
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