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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
sufS,csdA and sufD are separated by 52 nucleotides
sufD and sufC overlap by 4 nucleotides
sufC and sufB are separated by 91 nucleotides
sufB and iscR overlap by 4 nucleotides
OKGIIK_09950: sufS,csdA - cysteine desulfurase CsdA, at 2,146,794 to 2,148,041
sufS,csdA
OKGIIK_09955: sufD - Fe-S cluster assembly protein SufD, at 2,148,094 to 2,149,413
sufD
OKGIIK_09960: sufC - Fe-S cluster assembly ATPase SufC, at 2,149,410 to 2,150,174
sufC
OKGIIK_09965: sufB - Fe-S cluster assembly protein SufB, at 2,150,266 to 2,151,744
sufB
OKGIIK_09970: iscR - SUF system Fe-S cluster assembly regulator, at 2,151,741 to 2,152,226
iscR
Group
Condition
OKGIIK
_09950
OKGIIK
_09955
OKGIIK
_09960
OKGIIK
_09965
OKGIIK
_09970
sufS,csdA
sufD
sufC
sufB
iscR
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
N.D.
N.D.
-0.6
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
N.D.
N.D.
N.D.
-0.5
pH
R2A_PIPES pH 4
N.D.
N.D.
N.D.
N.D.
-0.5
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
N.D.
N.D.
N.D.
-0.4
no stress control
no stress control
N.D.
N.D.
N.D.
N.D.
-0.4
stress
R2A_PIPES with Nickel (II) chloride 424 uM
N.D.
N.D.
N.D.
N.D.
-0.3
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
N.D.
N.D.
N.D.
-0.3
no stress control
no stress control
N.D.
N.D.
N.D.
N.D.
-0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
N.D.
N.D.
N.D.
-0.2
no stress control
no stress control
N.D.
N.D.
N.D.
N.D.
-0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
N.D.
N.D.
N.D.
-0.1
pH
R2A_PIPES pH 4
N.D.
N.D.
N.D.
N.D.
-0.1
pH
R2A_PIPES pH 4.25
N.D.
N.D.
N.D.
N.D.
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
N.D.
N.D.
N.D.
-0.0
no stress control
no stress control
N.D.
N.D.
N.D.
N.D.
+0.0
no stress control
no stress control
N.D.
N.D.
N.D.
N.D.
+0.1
no stress control
no stress control
N.D.
N.D.
N.D.
N.D.
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
N.D.
N.D.
+0.2
pH
R2A_PIPES pH 4.5
N.D.
N.D.
N.D.
N.D.
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
N.D.
N.D.
N.D.
+0.2
no stress control
no stress control
N.D.
N.D.
N.D.
N.D.
+0.2
pH
R2A_PIPES pH 4.25
N.D.
N.D.
N.D.
N.D.
+0.2
pH
R2A_PIPES pH 4.5
N.D.
N.D.
N.D.
N.D.
+0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
N.D.
N.D.
N.D.
+0.3
no stress control
no stress control
N.D.
N.D.
N.D.
N.D.
+0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
N.D.
N.D.
+0.5
no stress control
no stress control
N.D.
N.D.
N.D.
N.D.
+0.6
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
N.D.
N.D.
+0.6
stress
R2A_PIPES with Cadmium chloride 128 uM
N.D.
N.D.
N.D.
N.D.
+1.1
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