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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_09405 and lolD overlap by 1 nucleotides
lolD and proA are separated by 193 nucleotides
proA and proB overlap by 4 nucleotides
proB and OKGIIK_09425 overlap by 4 nucleotides
OKGIIK_09405: OKGIIK_09405 - Efflux transporter periplasmic adaptor subunit, at 2,041,027 to 2,041,965
_09405
OKGIIK_09410: lolD - ABC-type lipoprotein export system, ATPase component, at 2,041,965 to 2,042,660
lolD
OKGIIK_09415: proA - glutamate-5-semialdehyde dehydrogenase, at 2,042,854 to 2,044,116
proA
OKGIIK_09420: proB - glutamate 5-kinase, at 2,044,113 to 2,045,273
proB
OKGIIK_09425: OKGIIK_09425 - Cupin, at 2,045,270 to 2,045,632
_09425
Group
Condition
OKGIIK
_09405
OKGIIK
_09410
OKGIIK
_09415
OKGIIK
_09420
OKGIIK
_09425
lolD
proA
proB
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.2
N.D.
+0.2
-0.5
-0.8
no stress control
no stress control
+0.1
N.D.
-0.1
-0.0
-1.0
pH
R2A_PIPES pH 4
-0.0
N.D.
-0.1
+0.0
-0.6
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.1
N.D.
+0.0
-0.1
-0.4
pH
R2A_PIPES pH 4.25
+0.0
N.D.
-0.3
-0.1
-0.1
no stress control
no stress control
+0.1
N.D.
-0.1
-0.2
-0.4
no stress control
no stress control
-0.0
N.D.
-0.1
-0.0
-0.4
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
N.D.
-0.1
-0.9
+0.7
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
N.D.
+0.0
+0.4
-0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
N.D.
+0.0
-0.1
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
N.D.
+0.1
+0.0
-0.0
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.1
N.D.
-0.2
+0.2
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
N.D.
-0.1
-0.1
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
N.D.
-0.1
+0.3
+0.0
pH
R2A_PIPES pH 4.5
+0.1
N.D.
-0.1
+0.1
+0.0
no stress control
no stress control
-0.0
N.D.
-0.0
+0.0
+0.1
no stress control
no stress control
-0.0
N.D.
+0.0
-0.0
+0.2
no stress control
no stress control
+0.0
N.D.
-0.2
+0.3
+0.1
no stress control
no stress control
+0.1
N.D.
-0.2
+0.3
+0.0
pH
R2A_PIPES pH 4.5
+0.0
N.D.
-0.0
+0.4
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.0
N.D.
-0.1
+0.1
+0.3
pH
R2A_PIPES pH 4.25
+0.1
N.D.
-0.0
+0.3
-0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
N.D.
-0.1
-0.0
+0.4
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.0
N.D.
-0.3
+0.0
+0.7
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
N.D.
+0.1
+0.1
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
N.D.
-0.1
+0.4
+0.4
no stress control
no stress control
+0.1
N.D.
-0.0
+0.5
+0.0
pH
R2A_PIPES pH 4
+0.2
N.D.
+0.2
+0.4
-0.2
no stress control
no stress control
+0.1
N.D.
-0.0
+0.3
+0.4
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