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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_08550 and OKGIIK_08555 overlap by 8 nucleotides
OKGIIK_08555 and ccmA are separated by 61 nucleotides
ccmA and ccmB are separated by 153 nucleotides
ccmB and ccmC are separated by 6 nucleotides
OKGIIK_08550: OKGIIK_08550 - kynurenine 3-monooxygenase, at 1,871,336 to 1,872,790
_08550
OKGIIK_08555: OKGIIK_08555 - DUF3293 domain-containing protein, at 1,872,783 to 1,873,190
_08555
OKGIIK_08560: ccmA - cytochrome c biogenesis heme-transporting ATPase CcmA, at 1,873,252 to 1,873,887
ccmA
OKGIIK_08565: ccmB - heme exporter protein CcmB, at 1,874,041 to 1,874,727
ccmB
OKGIIK_08570: ccmC - heme ABC transporter permease, at 1,874,734 to 1,875,492
ccmC
Group
Condition
OKGIIK
_08550
OKGIIK
_08555
OKGIIK
_08560
OKGIIK
_08565
OKGIIK
_08570
ccmA
ccmB
ccmC
no stress control
no stress control
-0.0
-0.5
N.D.
N.D.
N.D.
no stress control
no stress control
+0.1
-0.5
N.D.
N.D.
N.D.
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.0
-0.4
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.5
+0.1
-0.3
N.D.
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.0
-0.2
N.D.
N.D.
N.D.
no stress control
no stress control
+0.1
-0.4
N.D.
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
-0.1
N.D.
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.2
-0.4
N.D.
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
-0.2
N.D.
N.D.
N.D.
no stress control
no stress control
+0.0
-0.1
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.25
+0.2
-0.2
N.D.
N.D.
N.D.
no stress control
no stress control
+0.1
-0.2
N.D.
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.2
-0.3
N.D.
N.D.
N.D.
no stress control
no stress control
+0.2
-0.2
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.5
+0.0
-0.0
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4
+0.2
-0.2
N.D.
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
-0.1
N.D.
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.0
+0.0
N.D.
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.1
-0.1
N.D.
N.D.
N.D.
no stress control
no stress control
+0.2
-0.1
N.D.
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
-0.0
N.D.
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
+0.0
N.D.
N.D.
N.D.
no stress control
no stress control
+0.2
-0.1
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.25
+0.1
+0.0
N.D.
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.2
N.D.
N.D.
N.D.
no stress control
no stress control
+0.0
+0.4
N.D.
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.4
+0.0
N.D.
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.3
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4
+0.3
+0.1
N.D.
N.D.
N.D.
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