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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
yhbS and OKGIIK_08420 are separated by 25 nucleotides
OKGIIK_08420 and hutI are separated by 25 nucleotides
hutI and lpxK overlap by 15 nucleotides
lpxK and msbA are separated by 10 nucleotides
OKGIIK_08415: yhbS - carbon-nitrogen hydrolase, at 1,843,548 to 1,845,170
yhbS
OKGIIK_08420: OKGIIK_08420 - Chloride channel protein, at 1,845,196 to 1,846,665
_08420
OKGIIK_08425: hutI - imidazolonepropionase, at 1,846,691 to 1,847,920
hutI
OKGIIK_08430: lpxK - tetraacyldisaccharide 4'-kinase, at 1,847,906 to 1,848,889
lpxK
OKGIIK_08435: msbA - lipid A export permease/ATP-binding protein MsbA, at 1,848,900 to 1,850,684
msbA
Group
Condition
OKGIIK
_08415
OKGIIK
_08420
OKGIIK
_08425
OKGIIK
_08430
OKGIIK
_08435
yhbS
hutI
lpxK
msbA
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
-0.2
-0.6
N.D.
N.D.
pH
R2A_PIPES pH 4
+0.1
-0.4
+0.1
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.2
+0.2
-0.5
N.D.
N.D.
no stress control
no stress control
+0.2
+0.3
-0.6
N.D.
N.D.
no stress control
no stress control
+0.1
-0.2
+0.0
N.D.
N.D.
no stress control
no stress control
-0.1
+0.2
-0.2
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.1
-0.3
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.1
+0.2
-0.3
N.D.
N.D.
no stress control
no stress control
-0.0
+0.1
-0.1
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
+0.2
-0.2
N.D.
N.D.
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.1
+0.2
-0.1
N.D.
N.D.
no stress control
no stress control
-0.0
+0.3
-0.2
N.D.
N.D.
pH
R2A_PIPES pH 4
+0.2
-0.4
+0.3
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.3
-0.0
-0.1
N.D.
N.D.
no stress control
no stress control
+0.1
+0.1
+0.0
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.0
+0.2
+0.0
N.D.
N.D.
no stress control
no stress control
+0.1
+0.3
-0.2
N.D.
N.D.
no stress control
no stress control
+0.0
+0.1
+0.1
N.D.
N.D.
pH
R2A_PIPES pH 4.5
+0.2
+0.2
-0.1
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
+0.1
+0.2
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
+0.1
+0.1
N.D.
N.D.
pH
R2A_PIPES pH 4.25
+0.1
+0.1
+0.1
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.0
+0.2
+0.1
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.1
-0.1
+0.3
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
+0.0
+0.3
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.2
+0.1
+0.1
N.D.
N.D.
pH
R2A_PIPES pH 4.25
+0.3
+0.2
+0.0
N.D.
N.D.
no stress control
no stress control
+0.0
+0.3
+0.3
N.D.
N.D.
pH
R2A_PIPES pH 4.5
-0.0
+0.5
+0.3
N.D.
N.D.
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