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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_08405 and ssnA are separated by 605 nucleotides
ssnA and yhbS are separated by 20 nucleotides
yhbS and OKGIIK_08420 are separated by 25 nucleotides
OKGIIK_08420 and hutI are separated by 25 nucleotides
OKGIIK_08405: OKGIIK_08405 - multidrug resistance efflux transporter family protein, at 1,841,063 to 1,841,554
_08405
OKGIIK_08410: ssnA - formimidoylglutamate deiminase, at 1,842,160 to 1,843,527
ssnA
OKGIIK_08415: yhbS - carbon-nitrogen hydrolase, at 1,843,548 to 1,845,170
yhbS
OKGIIK_08420: OKGIIK_08420 - Chloride channel protein, at 1,845,196 to 1,846,665
_08420
OKGIIK_08425: hutI - imidazolonepropionase, at 1,846,691 to 1,847,920
hutI
Group
Condition
OKGIIK
_08405
OKGIIK
_08410
OKGIIK
_08415
OKGIIK
_08420
OKGIIK
_08425
ssnA
yhbS
hutI
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-0.4
-0.0
-0.2
-0.6
stress
R2A_PIPES with Cadmium chloride 128 uM
N.D.
-0.4
+0.1
+0.2
-0.3
no stress control
no stress control
N.D.
-0.1
+0.1
-0.2
+0.0
no stress control
no stress control
N.D.
-0.2
-0.0
+0.1
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-0.1
+0.1
+0.1
-0.3
no stress control
no stress control
N.D.
+0.0
+0.2
+0.3
-0.6
no stress control
no stress control
N.D.
-0.0
-0.1
+0.2
-0.2
no stress control
no stress control
N.D.
-0.1
-0.0
+0.3
-0.2
pH
R2A_PIPES pH 4
N.D.
+0.2
+0.1
-0.4
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
-0.0
+0.3
-0.0
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
+0.3
+0.2
+0.2
-0.5
stress
R2A_PIPES with Nickel (II) chloride 424 uM
N.D.
+0.1
+0.1
+0.2
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
-0.1
+0.1
+0.1
+0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
+0.1
+0.1
+0.2
-0.2
no stress control
no stress control
N.D.
+0.0
+0.0
+0.1
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
+0.1
+0.0
+0.2
+0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
-0.1
+0.2
+0.1
+0.1
pH
R2A_PIPES pH 4
N.D.
+0.1
+0.2
-0.4
+0.3
pH
R2A_PIPES pH 4.5
N.D.
+0.1
+0.2
+0.2
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
+0.1
-0.1
+0.1
+0.2
no stress control
no stress control
N.D.
+0.1
+0.1
+0.3
-0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
-0.0
+0.1
-0.1
+0.3
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
-0.0
+0.1
+0.0
+0.3
no stress control
no stress control
N.D.
+0.2
+0.1
+0.1
+0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
+0.1
+0.0
+0.2
+0.1
pH
R2A_PIPES pH 4.25
N.D.
+0.2
+0.1
+0.1
+0.1
pH
R2A_PIPES pH 4.25
N.D.
+0.2
+0.3
+0.2
+0.0
no stress control
no stress control
N.D.
-0.0
+0.0
+0.3
+0.3
pH
R2A_PIPES pH 4.5
N.D.
+0.1
-0.0
+0.5
+0.3
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