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Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
clpX and clpP are separated by 109 nucleotides
clpP and tig are separated by 38 nucleotides
tig and Leu_trna are separated by 92 nucleotides
Leu_trna and Lys_trna are separated by 274 nucleotides
OKGIIK_08035: clpX - ATP-dependent Clp protease ATP-binding subunit ClpX, at 1,774,925 to 1,776,217
clpX
OKGIIK_08040: clpP - ATP-dependent Clp endopeptidase proteolytic subunit ClpP, at 1,776,327 to 1,776,956
clpP
OKGIIK_08045: tig - trigger factor, at 1,776,995 to 1,778,287
tig
OKGIIK_08050: Leu_trna - tRNA-Leu, at 1,778,380 to 1,778,464
_trna
OKGIIK_08055: Lys_trna - tRNA-Lys, at 1,778,739 to 1,778,814
_trna
Group
Condition
OKGIIK
_08035
OKGIIK
_08040
OKGIIK
_08045
OKGIIK
_08050
OKGIIK
_08055
clpX
clpP
tig
Leu_trna
Lys_trna
stress
R2A_PIPES with Nickel (II) chloride 424 uM
N.D.
N.D.
-1.2
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
N.D.
-0.9
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-0.8
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
-0.8
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
N.D.
-0.7
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-0.7
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
N.D.
-0.7
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
-0.7
N.D.
N.D.
pH
R2A_PIPES pH 4
N.D.
N.D.
-0.6
N.D.
N.D.
pH
R2A_PIPES pH 4.25
N.D.
N.D.
-0.6
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-0.6
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
N.D.
-0.6
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-0.5
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-0.5
N.D.
N.D.
pH
R2A_PIPES pH 4.25
N.D.
N.D.
-0.4
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-0.4
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
-0.4
N.D.
N.D.
pH
R2A_PIPES pH 4
N.D.
N.D.
-0.4
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
N.D.
-0.3
N.D.
N.D.
pH
R2A_PIPES pH 4.5
N.D.
N.D.
-0.3
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-0.3
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
N.D.
-0.2
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
N.D.
-0.1
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-0.1
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 128 uM
N.D.
N.D.
-0.1
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-0.1
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
-0.1
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
N.D.
+0.0
N.D.
N.D.
pH
R2A_PIPES pH 4.5
N.D.
N.D.
+1.0
N.D.
N.D.
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