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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
mtnP and hptA are separated by 242 nucleotides
hptA and nagZ overlap by 4 nucleotides
nagZ and OKGIIK_07835 overlap by 7 nucleotides
OKGIIK_07835 and rlmD are separated by 159 nucleotides
OKGIIK_07820: mtnP - S-methyl-5'-thioinosine phosphorylase, at 1,731,858 to 1,732,619
mtnP
OKGIIK_07825: hptA - hypoxanthine-guanine phosphoribosyltransferase, at 1,732,862 to 1,733,425
hptA
OKGIIK_07830: nagZ - beta-N-acetylhexosaminidase, at 1,733,422 to 1,734,438
nagZ
OKGIIK_07835: OKGIIK_07835 - CYTH domain protein, at 1,734,432 to 1,734,953
_07835
OKGIIK_07840: rlmD - 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD, at 1,735,113 to 1,736,450
rlmD
Group
Condition
OKGIIK
_07820
OKGIIK
_07825
OKGIIK
_07830
OKGIIK
_07835
OKGIIK
_07840
mtnP
hptA
nagZ
rlmD
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.3
N.D.
-0.2
-0.6
no stress control
no stress control
+0.2
+0.1
N.D.
-0.3
-0.5
no stress control
no stress control
+0.3
+0.2
N.D.
-0.4
-0.6
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.2
-0.2
N.D.
-0.3
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
-0.1
N.D.
+0.1
-0.2
no stress control
no stress control
+0.1
-0.2
N.D.
+0.0
-0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.2
-0.0
N.D.
+0.0
-0.4
no stress control
no stress control
+0.1
-0.1
N.D.
-0.2
+0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.0
+0.0
N.D.
-0.0
-0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.3
+0.1
N.D.
-0.2
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.1
N.D.
+0.3
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
-0.2
N.D.
-0.0
+0.1
pH
R2A_PIPES pH 4.25
+0.1
+0.1
N.D.
+0.2
-0.3
no stress control
no stress control
+0.0
+0.1
N.D.
-0.1
+0.1
pH
R2A_PIPES pH 4
+0.0
-0.0
N.D.
+0.1
+0.0
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.2
-0.2
N.D.
-0.0
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.2
-0.3
N.D.
+0.3
-0.1
no stress control
no stress control
+0.2
+0.3
N.D.
-0.4
+0.2
pH
R2A_PIPES pH 4
+0.3
-0.0
N.D.
+0.2
-0.2
pH
R2A_PIPES pH 4.5
+0.0
-0.3
N.D.
+0.4
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.2
+0.1
N.D.
+0.0
+0.0
no stress control
no stress control
+0.5
+0.1
N.D.
-0.1
-0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.3
+0.1
N.D.
+0.0
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.3
-0.2
N.D.
+0.5
-0.1
no stress control
no stress control
+0.2
-0.1
N.D.
+0.1
+0.3
no stress control
no stress control
+0.2
-0.0
N.D.
+0.2
+0.2
pH
R2A_PIPES pH 4.25
+0.0
-0.1
N.D.
+0.3
+0.3
pH
R2A_PIPES pH 4.5
+0.3
-0.2
N.D.
+0.5
+0.3
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.5
+0.3
N.D.
+0.2
+0.3
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