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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
flaA1 and OKGIIK_07245 overlap by 14 nucleotides
OKGIIK_07245 and lapB are separated by 7 nucleotides
lapB and OKGIIK_07255 overlap by 4 nucleotides
OKGIIK_07255 and ihfB are separated by 155 nucleotides
OKGIIK_07240: flaA1 - polysaccharide biosynthesis protein, at 1,600,721 to 1,602,619
flaA1
OKGIIK_07245: OKGIIK_07245 - Glycosyl transferase family 4, at 1,602,606 to 1,603,628
_07245
OKGIIK_07250: lapB - lipopolysaccharide assembly protein LapB, at 1,603,636 to 1,604,808
lapB
OKGIIK_07255: OKGIIK_07255 - LapA-dom domain-containing protein, at 1,604,805 to 1,605,059
_07255
OKGIIK_07260: ihfB - integration host factor subunit beta, at 1,605,215 to 1,605,514
ihfB
Group
Condition
OKGIIK
_07240
OKGIIK
_07245
OKGIIK
_07250
OKGIIK
_07255
OKGIIK
_07260
flaA1
lapB
ihfB
stress
R2A_PIPES with Cobalt chloride 1024 uM
-1.9
-1.8
-2.3
-4.0
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
-2.3
-2.1
-2.9
-2.4
N.D.
no stress control
no stress control
-0.7
-2.0
-2.3
-2.4
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.9
-1.5
-2.7
-2.3
N.D.
no stress control
no stress control
-0.7
-1.6
-2.4
-2.4
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-1.2
-1.1
-2.4
-2.4
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-1.0
-1.1
-2.4
-2.3
N.D.
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-1.1
-0.8
-2.1
-2.5
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.7
-1.4
-2.9
-1.5
N.D.
no stress control
no stress control
-0.6
-1.2
-2.4
-2.0
N.D.
no stress control
no stress control
-0.5
-1.6
-1.9
-1.5
N.D.
no stress control
no stress control
-0.5
-1.5
-2.2
-1.5
N.D.
no stress control
no stress control
-0.9
-0.9
-2.2
-1.5
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.8
-1.4
-2.0
-1.1
N.D.
no stress control
no stress control
-0.8
-1.3
-2.0
-1.1
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.5
-1.5
-2.1
-1.1
N.D.
no stress control
no stress control
-0.5
-0.5
-1.6
-2.5
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.4
-1.1
-2.0
-1.6
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.8
-1.4
-2.3
-0.7
N.D.
no stress control
no stress control
-0.8
-1.1
-2.2
-0.4
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-1.0
-0.8
-1.7
-0.9
N.D.
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.7
-0.2
-1.4
-1.1
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.7
-0.2
-1.7
-0.5
N.D.
pH
R2A_PIPES pH 4.25
-0.6
-0.4
-0.4
-1.4
N.D.
pH
R2A_PIPES pH 4.25
-0.6
-0.6
-0.3
-0.6
N.D.
pH
R2A_PIPES pH 4.5
-0.8
-1.0
-0.2
+0.2
N.D.
pH
R2A_PIPES pH 4
-0.7
-0.4
+0.1
-0.7
N.D.
pH
R2A_PIPES pH 4
-0.9
-0.1
-0.1
-0.3
N.D.
pH
R2A_PIPES pH 4.5
-0.2
-0.4
-0.4
-0.4
N.D.
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