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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
lysS and OKGIIK_07030 are separated by 3 nucleotides
OKGIIK_07030 and OKGIIK_07035 overlap by 4 nucleotides
OKGIIK_07035 and smc are separated by 143 nucleotides
smc and zipA are separated by 10 nucleotides
OKGIIK_07025: lysS - lysine--tRNA ligase, at 1,556,456 to 1,557,991
lysS
OKGIIK_07030: OKGIIK_07030 - YciI family protein, at 1,557,995 to 1,558,294
_07030
OKGIIK_07035: OKGIIK_07035 - BolA family transcriptional regulator, at 1,558,291 to 1,558,545
_07035
OKGIIK_07040: smc - chromosome segregation protein SMC, at 1,558,689 to 1,562,198
smc
OKGIIK_07045: zipA - cell division protein ZipA, at 1,562,209 to 1,563,177
zipA
Group
Condition
OKGIIK
_07025
OKGIIK
_07030
OKGIIK
_07035
OKGIIK
_07040
OKGIIK
_07045
lysS
smc
zipA
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
+0.3
+0.0
-4.6
N.D.
no stress control
no stress control
N.D.
+0.1
-0.1
-3.1
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
+0.3
-0.4
-2.8
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.5
-0.1
-2.5
N.D.
no stress control
no stress control
N.D.
-0.0
-0.4
-1.5
N.D.
pH
R2A_PIPES pH 4.5
N.D.
+0.2
+0.0
-2.1
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
-0.0
+0.1
-2.0
N.D.
no stress control
no stress control
N.D.
+0.1
-0.3
-1.6
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
+0.4
-0.3
-1.8
N.D.
pH
R2A_PIPES pH 4
N.D.
+0.4
-0.4
-1.7
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.1
-0.6
-1.0
N.D.
no stress control
no stress control
N.D.
-0.1
-0.6
-0.6
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
+0.3
+0.0
-1.6
N.D.
pH
R2A_PIPES pH 4
N.D.
-0.2
-0.1
-1.0
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
+0.3
+0.1
-1.6
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
-0.1
+0.3
-1.5
N.D.
stress
R2A_PIPES with Nickel (II) chloride 424 uM
N.D.
+0.2
-0.2
-1.2
N.D.
no stress control
no stress control
N.D.
+0.3
-0.5
-1.0
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
+0.2
-0.6
-0.8
N.D.
no stress control
no stress control
N.D.
+0.3
-0.3
-1.1
N.D.
no stress control
no stress control
N.D.
+0.0
-0.2
-0.8
N.D.
no stress control
no stress control
N.D.
+0.2
-0.2
-1.0
N.D.
no stress control
no stress control
N.D.
+0.3
+0.1
-1.2
N.D.
pH
R2A_PIPES pH 4.5
N.D.
+0.2
-0.5
-0.3
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
+0.3
+0.0
-0.7
N.D.
pH
R2A_PIPES pH 4.25
N.D.
+0.3
+0.1
-0.6
N.D.
pH
R2A_PIPES pH 4.25
N.D.
+0.1
+0.0
-0.2
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
+0.2
-0.2
+0.1
N.D.
stress
R2A_PIPES with Cadmium chloride 128 uM
N.D.
+0.3
-0.4
+0.6
N.D.
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