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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
ompA and OKGIIK_06590 are separated by 120 nucleotides
OKGIIK_06590 and kbl are separated by 73 nucleotides
kbl and OKGIIK_06600 are separated by 87 nucleotides
OKGIIK_06600 and tdh are separated by 204 nucleotides
OKGIIK_06585: ompA - flagellar motor protein MotB, at 1,458,627 to 1,459,745
ompA
OKGIIK_06590: OKGIIK_06590 - Pseudouridine synthase, at 1,459,866 to 1,460,639
_06590
OKGIIK_06595: kbl - glycine C-acetyltransferase, at 1,460,713 to 1,461,912
kbl
OKGIIK_06600: OKGIIK_06600 - DUF748 domain-containing protein, at 1,462,000 to 1,465,635
_06600
OKGIIK_06605: tdh - L-threonine 3-dehydrogenase, at 1,465,840 to 1,466,874
tdh
Group
Condition
OKGIIK
_06585
OKGIIK
_06590
OKGIIK
_06595
OKGIIK
_06600
OKGIIK
_06605
ompA
kbl
tdh
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-2.8
-0.1
-0.5
-0.1
-0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-2.8
-0.0
+0.0
-0.0
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-2.7
-0.1
-0.1
+0.1
-0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
-3.0
+0.2
-0.2
+0.1
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-2.5
+0.0
-0.2
+0.1
-0.1
no stress control
no stress control
-2.4
+0.0
-0.2
-0.1
-0.0
no stress control
no stress control
-2.2
-0.2
-0.3
-0.0
-0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
-2.6
-0.1
+0.0
+0.1
-0.1
no stress control
no stress control
-2.4
-0.0
-0.1
+0.2
+0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
-2.3
-0.0
-0.2
+0.0
+0.1
no stress control
no stress control
-2.1
+0.0
-0.2
+0.1
-0.0
no stress control
no stress control
-2.1
+0.2
-0.2
-0.0
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-1.8
-0.2
-0.2
+0.1
-0.2
no stress control
no stress control
-2.3
-0.0
-0.0
+0.1
+0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-2.0
-0.0
-0.1
+0.0
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-2.0
-0.0
-0.2
+0.2
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-2.0
+0.1
-0.3
+0.0
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-2.3
+0.1
+0.0
+0.1
+0.0
no stress control
no stress control
-2.0
-0.1
-0.0
+0.1
-0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-1.8
-0.2
-0.2
+0.1
+0.1
no stress control
no stress control
-1.8
+0.0
-0.0
+0.1
-0.2
no stress control
no stress control
-1.7
+0.3
-0.0
+0.0
+0.0
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.9
-0.0
-0.2
-0.0
-0.2
pH
R2A_PIPES pH 4.5
-0.8
-0.0
-0.1
+0.1
+0.0
pH
R2A_PIPES pH 4.25
-0.6
-0.1
-0.1
+0.2
-0.0
pH
R2A_PIPES pH 4
+0.0
-0.1
-0.1
+0.1
-0.1
pH
R2A_PIPES pH 4.25
-0.2
-0.1
-0.0
+0.2
+0.1
pH
R2A_PIPES pH 4.5
-0.1
-0.1
-0.1
+0.1
+0.1
pH
R2A_PIPES pH 4
+0.0
-0.1
-0.1
+0.1
+0.1
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