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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
ahpF and ahpC are separated by 132 nucleotides
ahpC and gltP are separated by 181 nucleotides
gltP and prpB are separated by 164 nucleotides
prpB and OKGIIK_06570 are separated by 129 nucleotides
OKGIIK_06550: ahpF - alkyl hydroperoxide reductase subunit F, at 1,449,601 to 1,451,214
ahpF
OKGIIK_06555: ahpC - alkyl hydroperoxide reductase subunit C, at 1,451,347 to 1,451,910
ahpC
OKGIIK_06560: gltP - dicarboxylate/amino acid:cation symporter, at 1,452,092 to 1,453,408
gltP
OKGIIK_06565: prpB - methylisocitrate lyase, at 1,453,573 to 1,454,457
prpB
OKGIIK_06570: OKGIIK_06570 - Citrate synthase, at 1,454,587 to 1,455,732
_06570
Group
Condition
OKGIIK
_06550
OKGIIK
_06555
OKGIIK
_06560
OKGIIK
_06565
OKGIIK
_06570
ahpF
ahpC
gltP
prpB
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.1
-2.9
+0.1
-0.8
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
-1.7
+0.1
-1.3
-0.4
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
-2.3
+0.3
-0.7
+0.0
no stress control
no stress control
-0.0
-1.6
-0.0
-0.9
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
-1.5
-0.0
-0.8
-0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.2
-0.8
+0.0
-1.4
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
-1.6
+0.2
-0.6
+0.2
no stress control
no stress control
+0.1
-0.6
+0.2
-1.5
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
-0.7
-0.0
-1.1
-0.1
pH
R2A_PIPES pH 4
-0.2
-0.9
-0.1
-0.2
-0.4
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.0
-0.8
+0.1
-1.0
-0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
-1.1
+0.2
-0.6
+0.0
no stress control
no stress control
-0.1
-0.6
+0.1
-0.6
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
-0.7
+0.2
-0.4
-0.2
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.0
-0.0
-0.3
-0.6
-0.0
no stress control
no stress control
+0.1
-0.4
+0.2
-0.7
-0.2
pH
R2A_PIPES pH 4.25
+0.0
-0.5
-0.0
-0.2
-0.2
no stress control
no stress control
+0.0
-0.4
+0.2
-1.0
+0.3
pH
R2A_PIPES pH 4.25
-0.1
-0.4
-0.2
-0.3
+0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.0
-0.1
+0.1
-0.9
+0.1
pH
R2A_PIPES pH 4.5
+0.0
-0.5
+0.1
-0.4
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.0
-0.6
+0.1
-0.3
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.2
-0.1
-0.0
-0.8
+0.0
pH
R2A_PIPES pH 4
-0.1
-0.2
+0.1
-0.0
-0.3
pH
R2A_PIPES pH 4.5
-0.1
-0.0
+0.3
-0.6
-0.0
no stress control
no stress control
+0.2
-0.5
+0.5
-0.7
+0.1
no stress control
no stress control
+0.0
-0.3
+0.1
-0.3
+0.2
no stress control
no stress control
+0.2
+0.0
+0.2
-0.7
-0.0
no stress control
no stress control
+0.2
+0.0
+0.1
-0.3
+0.3
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