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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
cysH and lysR are separated by 58 nucleotides
lysR and cysG are separated by 321 nucleotides
cysG and cysK are separated by 69 nucleotides
cysK and hxlR are separated by 6 nucleotides
OKGIIK_05970: cysH - phosphoadenylyl-sulfate reductase, at 1,311,485 to 1,312,207
cysH
OKGIIK_05975: lysR - CysB family transcriptional regulator, at 1,312,266 to 1,313,261
lysR
OKGIIK_05980: cysG - siroheme synthase CysG, at 1,313,583 to 1,315,052
cysG
OKGIIK_05985: cysK - cysteine synthase A, at 1,315,122 to 1,316,060
cysK
OKGIIK_05990: hxlR - transcriptional regulator, at 1,316,067 to 1,316,492
hxlR
Group
Condition
OKGIIK
_05970
OKGIIK
_05975
OKGIIK
_05980
OKGIIK
_05985
OKGIIK
_05990
cysH
lysR
cysG
cysK
hxlR
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
+0.1
-0.5
-0.3
-0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.2
-0.6
-0.1
-0.3
+0.3
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.0
-0.6
+0.0
-0.4
+0.6
pH
R2A_PIPES pH 4.5
+0.3
+0.2
+0.4
-0.5
-0.5
no stress control
no stress control
+0.4
+0.1
-0.4
-0.1
-0.0
no stress control
no stress control
+0.1
+0.0
-0.2
-0.1
+0.3
no stress control
no stress control
+0.0
+0.3
-0.1
-0.1
+0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.0
-0.0
+0.3
-0.3
+0.3
pH
R2A_PIPES pH 4.5
-0.0
+0.1
-0.3
+0.1
+0.5
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
+0.4
+0.2
+0.1
-0.5
pH
R2A_PIPES pH 4
-0.3
+0.3
+0.3
-0.0
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.2
+0.3
-0.2
+0.2
+0.0
no stress control
no stress control
+0.3
+0.2
-0.4
-0.0
+0.5
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.3
-0.1
+0.4
-0.2
+0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
+0.2
-0.1
+0.2
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.2
+0.2
+0.2
+0.2
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.2
+0.4
+0.3
-0.1
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
+0.2
+0.3
+0.2
+0.0
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.1
+0.2
-0.3
+0.4
+0.5
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.2
+0.2
+0.2
+0.3
no stress control
no stress control
+0.2
+0.3
+0.1
+0.3
+0.3
no stress control
no stress control
+0.2
+0.1
+0.5
+0.2
+0.1
pH
R2A_PIPES pH 4
-0.3
+0.1
+0.6
+0.5
+0.3
pH
R2A_PIPES pH 4.25
+0.2
+0.4
+0.3
+0.1
+0.4
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.0
+0.1
+0.4
+0.4
+0.5
no stress control
no stress control
+0.4
+0.4
+0.1
+0.0
+0.5
pH
R2A_PIPES pH 4.25
+0.2
+0.3
+0.4
+0.4
+0.4
no stress control
no stress control
+0.3
+0.4
+0.5
+0.3
+0.4
no stress control
no stress control
-0.4
+0.5
+1.2
+0.5
+0.5
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