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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
roxA and tauE are separated by 34 nucleotides
tauE and OKGIIK_05960 are separated by 167 nucleotides
OKGIIK_05960 and cysI are separated by 79 nucleotides
cysI and cysH overlap by 4 nucleotides
OKGIIK_05950: roxA - transcription factor, at 1,305,764 to 1,306,957
roxA
OKGIIK_05955: tauE - sulfite exporter TauE/SafE family protein, at 1,306,992 to 1,307,744
tauE
OKGIIK_05960: OKGIIK_05960 - assimilatory sulfite reductase (NADPH) flavoprotein subunit, at 1,307,912 to 1,309,711
_05960
OKGIIK_05965: cysI - assimilatory sulfite reductase (NADPH) hemoprotein subunit, at 1,309,791 to 1,311,488
cysI
OKGIIK_05970: cysH - phosphoadenylyl-sulfate reductase, at 1,311,485 to 1,312,207
cysH
Group
Condition
OKGIIK
_05950
OKGIIK
_05955
OKGIIK
_05960
OKGIIK
_05965
OKGIIK
_05970
roxA
tauE
cysI
cysH
stress
R2A_PIPES with Cobalt chloride 1024 uM
-1.2
-3.3
-0.6
+0.2
-0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.9
-3.0
-0.8
+0.3
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.7
-1.6
-0.1
-0.0
+0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
-1.3
-0.2
+0.2
+0.3
no stress control
no stress control
-0.5
-0.1
+0.1
+0.1
-0.4
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-1.3
+0.1
-0.1
+0.4
+0.1
no stress control
no stress control
-1.3
+0.2
+0.2
+0.1
+0.2
no stress control
no stress control
-1.1
+0.1
+0.1
+0.1
+0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.7
+0.3
+0.1
+0.1
-0.2
no stress control
no stress control
-0.3
-0.0
+0.1
-0.1
+0.1
no stress control
no stress control
-1.1
+0.2
+0.3
+0.2
+0.2
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.1
+0.0
+0.1
-0.1
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
+0.1
+0.2
-0.2
-0.1
no stress control
no stress control
-0.2
+0.2
-0.1
+0.1
+0.3
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.3
+0.0
+0.1
+0.3
+0.1
no stress control
no stress control
-0.1
+0.2
-0.0
+0.0
+0.4
pH
R2A_PIPES pH 4.25
-0.3
+0.5
-0.1
+0.1
+0.2
pH
R2A_PIPES pH 4
-0.9
+1.0
+0.8
+0.0
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
+0.3
+0.5
+0.1
+0.1
no stress control
no stress control
-0.2
+0.3
+0.4
+0.4
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.0
+0.1
+0.3
+0.3
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.3
+0.2
+0.4
+0.5
+0.2
no stress control
no stress control
-0.2
+0.3
+0.3
+0.3
+0.4
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.4
+0.1
+0.3
+0.2
+0.1
pH
R2A_PIPES pH 4
-0.4
+1.0
+0.7
+0.2
-0.3
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.5
+0.2
+0.1
+0.3
+0.1
pH
R2A_PIPES pH 4.5
-0.3
+0.9
+0.4
+0.1
+0.3
pH
R2A_PIPES pH 4.25
+0.6
+0.4
+0.2
+0.2
+0.2
pH
R2A_PIPES pH 4.5
+0.6
+1.1
+0.1
+0.1
-0.0
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