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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_05540 and OKGIIK_05545 overlap by 4 nucleotides
OKGIIK_05545 and OKGIIK_05550 are separated by 96 nucleotides
OKGIIK_05550 and folC are separated by 100 nucleotides
folC and OKGIIK_05560 are separated by 78 nucleotides
OKGIIK_05540: OKGIIK_05540 - heavy metal-responsive transcriptional regulator, at 1,218,059 to 1,218,484
_05540
OKGIIK_05545: OKGIIK_05545 - Cation transporter, at 1,218,481 to 1,221,066
_05545
OKGIIK_05550: OKGIIK_05550 - hypothetical protein, at 1,221,163 to 1,221,327
_05550
OKGIIK_05555: folC - bifunctional tetrahydrofolate synthase/dihydrofolate synthase, at 1,221,428 to 1,222,717
folC
OKGIIK_05560: OKGIIK_05560 - Sporulation protein, at 1,222,796 to 1,223,821
_05560
Group
Condition
OKGIIK
_05540
OKGIIK
_05545
OKGIIK
_05550
OKGIIK
_05555
OKGIIK
_05560
folC
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.7
-0.2
+0.1
N.D.
N.D.
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.4
-0.2
+0.1
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.2
+0.0
-0.0
N.D.
N.D.
pH
R2A_PIPES pH 4.5
-0.3
-0.1
+0.2
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.1
+0.1
N.D.
N.D.
pH
R2A_PIPES pH 4.25
-0.2
+0.1
+0.0
N.D.
N.D.
no stress control
no stress control
-0.4
+0.1
+0.3
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.3
+0.1
+0.2
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
+0.0
+0.2
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.0
+0.1
-0.0
N.D.
N.D.
no stress control
no stress control
-0.2
+0.0
+0.2
N.D.
N.D.
no stress control
no stress control
-0.1
+0.0
+0.2
N.D.
N.D.
no stress control
no stress control
+0.1
-0.0
+0.1
N.D.
N.D.
no stress control
no stress control
+0.2
+0.0
+0.0
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.0
+0.2
-0.1
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
+0.1
-0.0
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.2
+0.2
+0.2
N.D.
N.D.
pH
R2A_PIPES pH 4
+0.1
-0.0
+0.1
N.D.
N.D.
no stress control
no stress control
+0.2
+0.0
+0.1
N.D.
N.D.
pH
R2A_PIPES pH 4.25
+0.2
-0.0
+0.1
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.2
-0.0
+0.2
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
+0.2
+0.3
N.D.
N.D.
no stress control
no stress control
+0.1
+0.1
+0.3
N.D.
N.D.
pH
R2A_PIPES pH 4.5
+0.2
+0.1
+0.2
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.2
+0.2
N.D.
N.D.
no stress control
no stress control
+0.4
+0.2
-0.0
N.D.
N.D.
pH
R2A_PIPES pH 4
+0.3
+0.1
+0.1
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.2
+0.1
+0.3
N.D.
N.D.
no stress control
no stress control
+0.1
+0.3
+0.7
N.D.
N.D.
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