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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_05125 and OKGIIK_05130 are separated by 113 nucleotides
OKGIIK_05130 and mdlB are separated by 99 nucleotides
mdlB and OKGIIK_05140 are separated by 81 nucleotides
OKGIIK_05140 and OKGIIK_05145 are separated by 130 nucleotides
OKGIIK_05125: OKGIIK_05125 - Mechanosensitive ion channel protein MscS, at 1,107,447 to 1,109,855
_05125
OKGIIK_05130: OKGIIK_05130 - Aldehyde-activating protein, at 1,109,969 to 1,110,457
_05130
OKGIIK_05135: mdlB - ABC-type multidrug transport system, ATPase and permease component, at 1,110,557 to 1,112,401
mdlB
OKGIIK_05140: OKGIIK_05140 - DUF5329 domain-containing protein, at 1,112,483 to 1,112,863
_05140
OKGIIK_05145: OKGIIK_05145 - Phospholipase, at 1,112,994 to 1,114,577
_05145
Group
Condition
OKGIIK
_05125
OKGIIK
_05130
OKGIIK
_05135
OKGIIK
_05140
OKGIIK
_05145
mdlB
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.1
+0.1
-0.0
-0.9
+0.0
pH
R2A_PIPES pH 4
-1.0
+0.3
-0.3
+0.0
+0.2
no stress control
no stress control
-0.5
+0.1
-0.2
+0.4
-0.5
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.4
+0.1
-0.1
-0.3
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.3
+0.1
-0.0
-0.1
-0.2
no stress control
no stress control
+0.0
+0.0
-0.4
+0.1
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.3
+0.3
-0.4
-0.0
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.4
+0.3
-0.2
+0.2
-0.1
no stress control
no stress control
-0.3
+0.4
-0.3
-0.0
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
+0.3
-0.2
+0.2
-0.2
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.0
+0.1
-0.1
-0.2
+0.3
no stress control
no stress control
-0.0
+0.2
+0.1
+0.1
-0.3
pH
R2A_PIPES pH 4.5
-0.0
+0.1
+0.3
-0.2
-0.0
no stress control
no stress control
-0.5
+0.3
-0.2
+0.6
+0.1
no stress control
no stress control
+0.0
+0.2
-0.0
+0.1
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.5
+0.2
-0.5
-0.1
+0.2
no stress control
no stress control
+0.2
+0.2
-0.2
+0.3
-0.1
pH
R2A_PIPES pH 4.25
-0.2
+0.2
+0.1
+0.3
-0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.2
+0.5
-0.3
+0.4
+0.0
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.4
-0.0
+0.1
+0.2
-0.3
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.4
+0.3
-0.2
-0.0
-0.0
pH
R2A_PIPES pH 4.25
-0.2
+0.3
-0.2
+0.3
+0.3
pH
R2A_PIPES pH 4
-0.3
+0.2
-0.4
+0.6
+0.4
no stress control
no stress control
+0.1
+0.4
-0.4
+0.4
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
+0.3
-0.0
+0.3
-0.0
pH
R2A_PIPES pH 4.5
+0.3
+0.1
-0.1
+0.0
+0.3
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.3
+0.2
-0.3
+0.5
+0.1
no stress control
no stress control
+0.4
+0.1
-0.1
+0.7
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.4
+0.3
+0.1
+1.0
+0.1
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