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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_04670 and nth are separated by 140 nucleotides
nth and OKGIIK_04680 overlap by 4 nucleotides
OKGIIK_04680 and metG are separated by 91 nucleotides
metG and OKGIIK_04690 are separated by 227 nucleotides
OKGIIK_04670: OKGIIK_04670 - Methyltransferase, at 1,020,636 to 1,021,244
_04670
OKGIIK_04675: nth - endonuclease III, at 1,021,385 to 1,022,020
nth
OKGIIK_04680: OKGIIK_04680 - Electron transporter RnfB, at 1,022,017 to 1,022,625
_04680
OKGIIK_04685: metG - methionine--tRNA ligase, at 1,022,717 to 1,024,846
metG
OKGIIK_04690: OKGIIK_04690 - DUF2147 domain-containing protein, at 1,025,074 to 1,025,538
_04690
Group
Condition
OKGIIK
_04670
OKGIIK
_04675
OKGIIK
_04680
OKGIIK
_04685
OKGIIK
_04690
nth
metG
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.0
-0.1
-1.0
N.D.
-0.0
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.3
-0.1
-0.6
N.D.
+0.1
no stress control
no stress control
-0.1
-0.1
-0.6
N.D.
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.7
-0.1
N.D.
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.1
-0.3
-0.4
N.D.
+0.1
no stress control
no stress control
-0.1
-0.2
-0.4
N.D.
-0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.3
+0.1
-0.4
N.D.
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
-0.3
-0.3
N.D.
-0.1
pH
R2A_PIPES pH 4.5
+0.2
-0.3
-0.3
N.D.
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.2
-0.1
-0.1
N.D.
-0.2
pH
R2A_PIPES pH 4.25
-0.1
-0.0
-0.4
N.D.
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.1
-0.5
N.D.
-0.0
no stress control
no stress control
+0.1
-0.3
-0.2
N.D.
+0.1
no stress control
no stress control
+0.0
-0.0
-0.3
N.D.
-0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.1
+0.0
-0.4
N.D.
+0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.0
+0.2
-0.4
N.D.
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.1
-0.1
+0.1
N.D.
-0.1
no stress control
no stress control
+0.1
-0.1
-0.3
N.D.
+0.2
pH
R2A_PIPES pH 4.5
+0.2
+0.1
-0.3
N.D.
+0.1
pH
R2A_PIPES pH 4
-0.1
+0.1
-0.5
N.D.
+0.6
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.1
+0.1
N.D.
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
-0.0
-0.1
N.D.
+0.3
no stress control
no stress control
-0.0
+0.1
-0.0
N.D.
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.2
+0.0
+0.0
N.D.
-0.1
no stress control
no stress control
+0.3
-0.0
-0.2
N.D.
+0.2
no stress control
no stress control
+0.0
-0.0
-0.0
N.D.
+0.3
pH
R2A_PIPES pH 4
+0.0
-0.1
-0.1
N.D.
+0.5
pH
R2A_PIPES pH 4.25
+0.0
+0.3
-0.3
N.D.
+0.4
no stress control
no stress control
+0.1
-0.0
-0.7
N.D.
+1.1
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