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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
rsuA and ssuD are separated by 17 nucleotides
ssuD and rIO1 are separated by 84 nucleotides
rIO1 and fieF are separated by 22 nucleotides
fieF and slp are separated by 65 nucleotides
OKGIIK_04535: rsuA - RNA-binding protein, at 992,992 to 993,801
rsuA
OKGIIK_04540: ssuD - LLM class flavin-dependent oxidoreductase, at 993,819 to 994,817
ssuD
OKGIIK_04545: rIO1 - serine protein kinase RIO, at 994,902 to 995,759
rIO1
OKGIIK_04550: fieF - cation efflux family transporter, at 995,782 to 996,693
fieF
OKGIIK_04555: slp - Outer membrane lipoprotein Slp family, at 996,759 to 997,274
slp
Group
Condition
OKGIIK
_04535
OKGIIK
_04540
OKGIIK
_04545
OKGIIK
_04550
OKGIIK
_04555
rsuA
ssuD
rIO1
fieF
slp
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.0
-0.5
-0.1
-0.0
-0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.4
-0.1
-0.0
-0.2
-0.2
no stress control
no stress control
+0.1
-0.3
-0.2
-0.2
-0.2
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.3
-0.3
+0.0
+0.2
-0.2
pH
R2A_PIPES pH 4.5
+0.1
-0.3
-0.1
-0.3
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.3
+0.1
-0.3
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.0
+0.2
+0.0
-0.5
-0.3
no stress control
no stress control
-0.4
-0.1
-0.1
+0.1
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.0
-0.4
+0.0
-0.2
+0.0
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.1
+0.1
-0.1
-0.0
-0.3
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.2
-0.3
-0.1
-0.0
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
-0.3
+0.0
+0.0
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
-0.1
+0.2
-0.1
-0.2
pH
R2A_PIPES pH 4.5
-0.3
+0.2
-0.1
+0.1
-0.2
no stress control
no stress control
-0.1
+0.1
-0.1
-0.0
-0.1
pH
R2A_PIPES pH 4
-0.1
+0.3
-0.2
-0.3
-0.1
pH
R2A_PIPES pH 4.25
-0.1
+0.1
-0.2
-0.1
-0.1
no stress control
no stress control
-0.1
+0.1
+0.0
-0.2
-0.2
pH
R2A_PIPES pH 4.25
+0.0
-0.1
-0.0
+0.1
-0.3
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.1
+0.2
-0.1
-0.2
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
-0.1
+0.1
-0.0
+0.0
pH
R2A_PIPES pH 4
-0.3
+0.2
+0.1
+0.2
-0.3
no stress control
no stress control
+0.1
+0.2
-0.0
-0.1
-0.2
no stress control
no stress control
+0.3
-0.3
-0.1
+0.0
+0.1
no stress control
no stress control
-0.2
-0.1
-0.1
+0.1
+0.4
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
-0.0
-0.1
+0.4
+0.0
no stress control
no stress control
+0.1
+0.0
+0.0
-0.0
+0.1
no stress control
no stress control
-0.0
+0.3
-0.0
+0.2
-0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
-0.1
-0.1
+0.3
+0.3
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