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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_04415 and thpR are separated by 65 nucleotides
thpR and OKGIIK_04425 are separated by 7 nucleotides
OKGIIK_04425 and OKGIIK_04430 are separated by 152 nucleotides
OKGIIK_04430 and hflC are separated by 167 nucleotides
OKGIIK_04415: OKGIIK_04415 - DUF3014 domain-containing protein, at 958,681 to 959,514
_04415
OKGIIK_04420: thpR - RNA 2',3'-cyclic phosphodiesterase, at 959,580 to 960,179
thpR
OKGIIK_04425: OKGIIK_04425 - Transcriptional regulator, at 960,187 to 960,642
_04425
OKGIIK_04430: OKGIIK_04430 - Serine protease, at 960,795 to 962,186
_04430
OKGIIK_04435: hflC - SPFH domain / Band 7 family, at 962,354 to 963,130
hflC
Group
Condition
OKGIIK
_04415
OKGIIK
_04420
OKGIIK
_04425
OKGIIK
_04430
OKGIIK
_04435
thpR
hflC
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
-0.1
-0.9
-0.2
+0.2
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.1
-0.3
-0.8
-0.0
+0.4
pH
R2A_PIPES pH 4.5
+0.1
+0.1
-0.6
-0.1
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
+0.0
-0.3
-0.1
-0.0
no stress control
no stress control
+0.1
-0.2
-0.3
-0.0
+0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
-0.1
-0.2
-0.2
+0.0
pH
R2A_PIPES pH 4.25
+0.0
+0.1
-0.1
-0.1
-0.2
no stress control
no stress control
+0.1
-0.2
-0.1
-0.1
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
-0.1
-0.1
+0.1
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.0
+0.1
-0.2
-0.0
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.0
+0.2
-0.1
-0.1
-0.2
no stress control
no stress control
+0.0
+0.0
-0.1
-0.1
+0.0
pH
R2A_PIPES pH 4.5
+0.0
-0.1
+0.2
+0.1
-0.3
pH
R2A_PIPES pH 4
-0.0
+0.1
-0.3
+0.1
+0.1
no stress control
no stress control
+0.0
+0.1
-0.3
-0.1
+0.2
no stress control
no stress control
+0.0
+0.2
-0.0
-0.1
-0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
+0.2
+0.1
-0.2
-0.0
pH
R2A_PIPES pH 4
-0.1
+0.1
-0.2
+0.0
+0.3
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.0
+0.0
+0.1
-0.2
+0.3
no stress control
no stress control
+0.0
+0.1
+0.0
-0.0
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.3
+0.1
-0.4
+0.2
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.0
-0.1
+0.6
-0.0
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.2
+0.1
-0.3
+0.1
+0.3
pH
R2A_PIPES pH 4.25
+0.1
+0.2
+0.1
-0.1
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.2
+0.2
+0.0
-0.1
no stress control
no stress control
+0.3
+0.2
-0.5
+0.3
+0.3
no stress control
no stress control
+0.2
+0.0
+0.2
+0.0
+0.0
no stress control
no stress control
+0.1
+0.2
+0.2
-0.1
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
+0.1
+0.2
+0.0
+0.3
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