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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_04210 and OKGIIK_04215 are separated by 24 nucleotides
OKGIIK_04215 and OKGIIK_04220 are separated by 433 nucleotides
OKGIIK_04220 and bcp are separated by 82 nucleotides
bcp and OKGIIK_04230 are separated by 227 nucleotides
OKGIIK_04210: OKGIIK_04210 - M20/M25/M40 family metallo-hydrolase, at 919,990 to 920,451
_04210
OKGIIK_04215: OKGIIK_04215 - MFS transporter, at 920,476 to 921,957
_04215
OKGIIK_04220: OKGIIK_04220 - Peptidase, at 922,391 to 923,968
_04220
OKGIIK_04225: bcp - Peroxiredoxin, at 924,051 to 924,602
bcp
OKGIIK_04230: OKGIIK_04230 - hypothetical protein, at 924,830 to 925,216
_04230
Group
Condition
OKGIIK
_04210
OKGIIK
_04215
OKGIIK
_04220
OKGIIK
_04225
OKGIIK
_04230
bcp
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.0
+0.1
-0.2
+0.1
-1.5
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.1
-0.0
+0.0
-0.1
-1.1
no stress control
no stress control
-0.6
+0.0
+0.0
-0.1
-0.4
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.4
-0.1
+0.0
-0.2
-0.3
no stress control
no stress control
-0.0
+0.1
-0.3
-0.1
-0.7
no stress control
no stress control
-0.8
+0.1
+0.1
+0.2
-0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.4
+0.0
+0.1
-0.1
-0.3
pH
R2A_PIPES pH 4.25
-0.4
+0.1
-0.0
+0.0
-0.4
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.4
+0.0
-0.1
+0.1
-0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.5
+0.0
-0.0
+0.3
-0.4
no stress control
no stress control
-0.6
+0.2
+0.0
-0.1
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
+0.1
+0.0
-0.0
-0.4
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.5
+0.2
-0.0
+0.1
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
+0.2
+0.2
-0.2
-0.4
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.4
+0.2
-0.0
-0.1
+0.0
no stress control
no stress control
+0.1
+0.1
+0.0
-0.1
-0.5
no stress control
no stress control
-0.6
+0.1
+0.1
-0.1
+0.3
pH
R2A_PIPES pH 4.5
-0.6
+0.1
+0.1
+0.0
+0.2
no stress control
no stress control
-0.4
+0.2
-0.0
+0.1
+0.0
pH
R2A_PIPES pH 4
-0.3
+0.1
+0.0
-0.1
+0.1
pH
R2A_PIPES pH 4
-0.4
+0.2
+0.1
-0.1
+0.1
no stress control
no stress control
+0.0
+0.1
-0.1
+0.1
-0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.0
-0.0
+0.2
+0.0
-0.3
pH
R2A_PIPES pH 4.5
-0.5
+0.0
+0.0
+0.1
+0.5
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.1
+0.0
+0.0
-0.1
no stress control
no stress control
+0.1
+0.2
-0.1
+0.0
+0.0
pH
R2A_PIPES pH 4.25
+0.1
-0.0
-0.0
+0.1
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
+0.2
-0.0
+0.0
+0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.0
+0.2
+0.2
+0.1
+0.1
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