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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
gdhA and OKGIIK_04055 are separated by 228 nucleotides
OKGIIK_04055 and bepA are separated by 72 nucleotides
bepA and OKGIIK_04065 are separated by 109 nucleotides
OKGIIK_04065 and OKGIIK_04070 are separated by 27 nucleotides
OKGIIK_04050: gdhA - leucine dehydrogenase, at 887,705 to 888,808
gdhA
OKGIIK_04055: OKGIIK_04055 - Putative signal peptide protein, at 889,037 to 889,363
_04055
OKGIIK_04060: bepA - peptidase, at 889,436 to 890,233
bepA
OKGIIK_04065: OKGIIK_04065 - TetR family transcriptional regulator, at 890,343 to 890,945
_04065
OKGIIK_04070: OKGIIK_04070 - Hydrolase, at 890,973 to 891,890
_04070
Group
Condition
OKGIIK
_04050
OKGIIK
_04055
OKGIIK
_04060
OKGIIK
_04065
OKGIIK
_04070
gdhA
bepA
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.4
-0.5
-0.4
-0.6
+0.1
no stress control
no stress control
-0.2
-0.8
-0.1
-0.5
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
-0.3
-0.4
-0.6
-0.2
pH
R2A_PIPES pH 4.25
-0.0
-0.4
-0.4
-0.5
-0.0
pH
R2A_PIPES pH 4.25
-0.1
-0.7
-0.2
-0.3
-0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.2
-0.1
-0.7
-0.2
-0.0
pH
R2A_PIPES pH 4.5
-0.1
-0.5
-0.0
-0.6
+0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.0
-0.4
-0.5
-0.4
+0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.2
-0.4
-0.3
-0.4
+0.2
no stress control
no stress control
+0.1
-0.4
-0.3
-0.4
-0.0
pH
R2A_PIPES pH 4.5
+0.1
-0.1
-0.4
-0.5
+0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
-0.3
-0.2
-0.4
-0.0
no stress control
no stress control
+0.0
-0.4
-0.1
-0.4
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.1
-0.2
-0.6
-0.2
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.3
-0.1
-0.4
-0.1
-0.0
pH
R2A_PIPES pH 4
-0.1
-0.2
+0.1
-0.7
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
-0.2
-0.5
+0.0
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.0
-0.1
-0.4
-0.2
+0.0
no stress control
no stress control
-0.1
-0.4
-0.5
+0.2
+0.1
no stress control
no stress control
+0.1
-0.3
+0.0
-0.4
-0.0
no stress control
no stress control
-0.0
-0.0
-0.2
-0.5
+0.1
no stress control
no stress control
-0.1
-0.1
-0.2
-0.3
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.1
-0.5
-0.3
+0.1
+0.1
no stress control
no stress control
+0.1
-0.2
-0.5
+0.1
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.2
+0.0
-0.2
+0.0
pH
R2A_PIPES pH 4
-0.2
+0.0
-0.3
+0.1
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.0
-0.1
-0.2
-0.4
+0.1
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.0
-0.1
+0.2
-0.5
+0.1
no stress control
no stress control
+0.0
+0.3
-0.4
+0.0
-0.1
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