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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_04005 and fTR1 are separated by 4 nucleotides
fTR1 and OKGIIK_04015 are separated by 1 nucleotides
OKGIIK_04015 and OKGIIK_04020 are separated by 154 nucleotides
OKGIIK_04020 and paaJ are separated by 162 nucleotides
OKGIIK_04005: OKGIIK_04005 - Cupredoxin-1 domain-containing protein, at 876,621 to 876,944
_04005
OKGIIK_04010: fTR1 - High-affinity Fe2+/Pb2+ permease, at 876,949 to 877,749
fTR1
OKGIIK_04015: OKGIIK_04015 - Methylcrotonoyl-CoA carboxylase, at 877,751 to 879,358
_04015
OKGIIK_04020: OKGIIK_04020 - Large subunit ribosomal protein L19e, at 879,513 to 879,893
_04020
OKGIIK_04025: paaJ - acetyl-CoA C-acyltransferase, at 880,056 to 881,240
paaJ
Group
Condition
OKGIIK
_04005
OKGIIK
_04010
OKGIIK
_04015
OKGIIK
_04020
OKGIIK
_04025
fTR1
paaJ
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.4
-0.5
-0.1
-1.9
-0.2
no stress control
no stress control
-0.3
-0.1
+0.0
-2.5
+0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.2
-0.2
-1.5
-0.3
no stress control
no stress control
-0.1
-0.2
-0.1
-1.5
-0.4
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.0
-0.5
-0.0
-1.1
-0.0
pH
R2A_PIPES pH 4
-0.2
-0.2
-0.1
-0.9
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.5
-0.2
-0.3
-0.5
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.0
-0.7
-0.2
-0.4
-0.2
no stress control
no stress control
-0.3
-0.3
-0.1
-0.4
-0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.8
-0.1
-0.4
-0.2
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.1
-0.7
-0.1
+0.0
-0.2
no stress control
no stress control
-0.2
-0.0
-0.3
-0.3
-0.2
pH
R2A_PIPES pH 4
+0.4
-0.0
-0.3
-0.9
-0.2
no stress control
no stress control
-0.1
-0.2
-0.1
-0.5
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.2
-0.7
-0.3
+0.3
-0.1
no stress control
no stress control
-0.4
-0.3
+0.0
-0.3
+0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.0
-0.6
-0.1
-0.2
+0.0
pH
R2A_PIPES pH 4.25
-0.0
+0.1
-0.1
-0.7
-0.2
pH
R2A_PIPES pH 4.5
-0.1
-0.5
-0.0
-0.1
-0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
-0.2
-0.2
-0.2
-0.1
no stress control
no stress control
+0.3
-0.7
-0.3
-0.0
-0.1
pH
R2A_PIPES pH 4.5
-0.0
+0.1
-0.1
-0.1
-0.6
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.2
-0.2
-0.1
+0.3
-0.4
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
-0.2
-0.4
-0.2
+0.3
pH
R2A_PIPES pH 4.25
-0.0
+0.2
-0.0
-0.1
-0.2
no stress control
no stress control
-0.2
+0.0
-0.1
+0.0
+0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.1
-0.3
-0.1
+0.3
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
+0.3
+0.0
-0.0
-0.2
no stress control
no stress control
+0.1
-0.3
+0.0
+0.4
-0.1
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