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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_03975 and uvrA overlap by 4 nucleotides
uvrA and OKGIIK_03985 are separated by 149 nucleotides
OKGIIK_03985 and rplU are separated by 110 nucleotides
rplU and rpmA are separated by 19 nucleotides
OKGIIK_03975: OKGIIK_03975 - Thioesterase, at 870,267 to 870,728
_03975
OKGIIK_03980: uvrA - excinuclease ABC subunit UvrA, at 870,725 to 873,688
uvrA
OKGIIK_03985: OKGIIK_03985 - DUF2059 domain-containing protein, at 873,838 to 874,470
_03985
OKGIIK_03990: rplU - 50S ribosomal protein L21, at 874,581 to 874,895
rplU
OKGIIK_03995: rpmA - 50S ribosomal protein L27, at 874,915 to 875,172
rpmA
Group
Condition
OKGIIK
_03975
OKGIIK
_03980
OKGIIK
_03985
OKGIIK
_03990
OKGIIK
_03995
uvrA
rplU
rpmA
no stress control
no stress control
+0.1
-0.1
-0.7
N.D.
N.D.
no stress control
no stress control
-0.1
-0.2
-0.2
N.D.
N.D.
no stress control
no stress control
+0.1
-0.1
-0.4
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.2
-0.3
-0.2
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
-0.1
+0.0
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.1
-0.2
+0.0
N.D.
N.D.
no stress control
no stress control
+0.1
-0.2
-0.1
N.D.
N.D.
pH
R2A_PIPES pH 4.25
+0.0
+0.0
-0.2
N.D.
N.D.
no stress control
no stress control
+0.0
-0.1
-0.1
N.D.
N.D.
pH
R2A_PIPES pH 4.5
+0.1
-0.1
-0.2
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.0
-0.2
-0.0
N.D.
N.D.
no stress control
no stress control
-0.2
+0.0
-0.0
N.D.
N.D.
pH
R2A_PIPES pH 4.5
-0.0
-0.0
-0.1
N.D.
N.D.
no stress control
no stress control
-0.0
-0.1
+0.0
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.3
-0.2
-0.2
N.D.
N.D.
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.0
-0.1
-0.0
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.1
+0.1
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.0
-0.2
+0.2
N.D.
N.D.
no stress control
no stress control
-0.1
-0.2
+0.2
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.1
+0.2
N.D.
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
-0.2
+0.3
N.D.
N.D.
pH
R2A_PIPES pH 4
+0.2
+0.2
-0.3
N.D.
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.0
-0.1
+0.2
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.0
+0.2
N.D.
N.D.
pH
R2A_PIPES pH 4.25
+0.0
-0.0
+0.1
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
-0.0
+0.1
N.D.
N.D.
no stress control
no stress control
+0.1
-0.1
+0.3
N.D.
N.D.
pH
R2A_PIPES pH 4
+0.2
+0.1
+0.1
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
-0.0
+0.3
N.D.
N.D.
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