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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_03830 and OKGIIK_03835 are separated by 38 nucleotides
OKGIIK_03835 and ylaK overlap by 4 nucleotides
ylaK and bcp are separated by 64 nucleotides
bcp and OKGIIK_03850 are separated by 257 nucleotides
OKGIIK_03830: OKGIIK_03830 - Methyltransf-25 domain-containing protein, at 844,264 to 845,370
_03830
OKGIIK_03835: OKGIIK_03835 - Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase, at 845,409 to 846,215
_03835
OKGIIK_03840: ylaK - phosphate starvation-inducible protein PhoH, at 846,212 to 847,594
ylaK
OKGIIK_03845: bcp - peroxiredoxin, at 847,659 to 848,120
bcp
OKGIIK_03850: OKGIIK_03850 - Glycine cleavage system transcriptional repressor, at 848,378 to 849,040
_03850
Group
Condition
OKGIIK
_03830
OKGIIK
_03835
OKGIIK
_03840
OKGIIK
_03845
OKGIIK
_03850
ylaK
bcp
pH
R2A_PIPES pH 4
-0.2
-0.1
+0.1
-0.3
-0.9
pH
R2A_PIPES pH 4.5
-0.6
-0.2
-0.2
+0.1
-0.1
pH
R2A_PIPES pH 4
-0.1
-0.1
-0.0
+0.3
-0.8
no stress control
no stress control
+0.0
-0.1
-0.1
+0.3
-0.6
no stress control
no stress control
-0.4
-0.1
-0.1
+0.2
-0.2
pH
R2A_PIPES pH 4.5
+0.2
+0.1
-0.1
-0.2
-0.6
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.2
-0.0
+0.0
-0.2
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.0
+0.0
-0.1
-0.1
-0.1
no stress control
no stress control
-0.1
-0.4
+0.3
+0.2
-0.2
no stress control
no stress control
-0.3
-0.2
+0.1
+0.1
+0.1
no stress control
no stress control
-0.7
+0.3
-0.1
+0.2
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.2
+0.0
+0.1
-0.0
-0.1
no stress control
no stress control
-0.1
-0.0
+0.4
-0.2
-0.2
no stress control
no stress control
+0.0
-0.1
+0.2
+0.1
-0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.3
-0.0
+0.1
+0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.1
-0.6
+0.2
+0.1
+0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
+0.1
-0.0
-0.1
+0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.0
-0.2
+0.2
-0.2
+0.3
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.2
-0.2
+0.2
-0.1
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.1
-0.2
+0.1
+0.2
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.1
+0.1
+0.3
-0.0
-0.3
no stress control
no stress control
+0.2
-0.3
+0.1
+0.2
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
+0.0
+0.2
+0.1
+0.2
pH
R2A_PIPES pH 4.25
+0.2
-0.0
+0.2
+0.1
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.2
-0.1
+0.3
+0.1
-0.1
pH
R2A_PIPES pH 4.25
-0.1
-0.0
+0.3
+0.4
-0.2
no stress control
no stress control
-0.1
+0.2
+0.1
+0.1
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.3
-0.1
+0.2
+0.1
+0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
+0.1
+0.2
+0.2
+0.2
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