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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_03715 and OKGIIK_03720 are separated by 12 nucleotides
OKGIIK_03720 and OKGIIK_03725 are separated by 113 nucleotides
OKGIIK_03725 and OKGIIK_03730 are separated by 128 nucleotides
OKGIIK_03730 and pncC are separated by 647 nucleotides
OKGIIK_03715: OKGIIK_03715 - Vault protein inter-alpha-trypsin domain-containing protein, at 820,070 to 822,271
_03715
OKGIIK_03720: OKGIIK_03720 - HTH merR-type domain-containing protein, at 822,284 to 822,697
_03720
OKGIIK_03725: OKGIIK_03725 - DUF6804 domain-containing protein, at 822,811 to 823,125
_03725
OKGIIK_03730: OKGIIK_03730 - hypothetical protein, at 823,254 to 823,793
_03730
OKGIIK_03735: pncC - damage-inducible protein CinA, at 824,441 to 824,950
pncC
Group
Condition
OKGIIK
_03715
OKGIIK
_03720
OKGIIK
_03725
OKGIIK
_03730
OKGIIK
_03735
pncC
pH
R2A_PIPES pH 4.25
-0.1
-0.2
-0.3
-0.1
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.0
-0.2
-0.2
-0.2
-0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.1
-0.3
-0.2
+0.0
-0.1
pH
R2A_PIPES pH 4
-0.1
-0.3
-0.1
+0.0
-0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.0
-0.3
-0.1
+0.0
-0.1
no stress control
no stress control
-0.1
-0.4
-0.1
+0.0
+0.0
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.1
-0.1
-0.3
+0.0
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
+0.0
-0.2
-0.1
-0.1
no stress control
no stress control
+0.1
-0.1
-0.3
-0.1
-0.0
no stress control
no stress control
-0.2
+0.0
-0.5
+0.1
+0.1
pH
R2A_PIPES pH 4
+0.0
-0.3
-0.1
-0.1
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
-0.1
+0.0
-0.0
-0.3
no stress control
no stress control
-0.0
-0.2
-0.2
+0.1
-0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.0
-0.0
-0.2
-0.1
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.2
-0.2
-0.3
+0.0
+0.4
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
-0.3
-0.1
+0.1
+0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.0
-0.3
+0.0
+0.1
-0.1
no stress control
no stress control
-0.0
-0.1
+0.0
+0.1
-0.1
no stress control
no stress control
+0.1
+0.1
-0.2
-0.1
-0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.0
-0.3
-0.0
+0.1
+0.1
pH
R2A_PIPES pH 4.25
-0.1
-0.0
+0.1
-0.0
-0.1
no stress control
no stress control
-0.0
-0.3
+0.1
+0.1
+0.0
no stress control
no stress control
+0.0
-0.0
-0.3
+0.1
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.2
-0.0
+0.0
+0.1
no stress control
no stress control
+0.1
+0.0
+0.1
-0.1
-0.1
pH
R2A_PIPES pH 4.5
+0.0
-0.0
+0.0
-0.1
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.0
+0.0
-0.2
+0.1
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.0
+0.1
+0.0
+0.1
+0.0
pH
R2A_PIPES pH 4.5
-0.0
+0.3
+0.1
+0.1
-0.0
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