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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
mmsB and yHI9 are separated by 112 nucleotides
yHI9 and glpG are separated by 185 nucleotides
glpG and OKGIIK_03525 are separated by 86 nucleotides
OKGIIK_03525 and OKGIIK_03530 are separated by 139 nucleotides
OKGIIK_03510: mmsB - 3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase, at 779,715 to 780,599
mmsB
OKGIIK_03515: yHI9 - PhzF family phenazine biosynthesis protein, at 780,712 to 781,590
yHI9
OKGIIK_03520: glpG - rhomboid family intramembrane serine protease, at 781,776 to 782,387
glpG
OKGIIK_03525: OKGIIK_03525 - histone H1-like repetitive region-containing protein, at 782,474 to 783,103
_03525
OKGIIK_03530: OKGIIK_03530 - hypothetical protein, at 783,243 to 783,668
_03530
Group
Condition
OKGIIK
_03510
OKGIIK
_03515
OKGIIK
_03520
OKGIIK
_03525
OKGIIK
_03530
mmsB
yHI9
glpG
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.9
+0.0
-0.3
-0.1
+0.0
no stress control
no stress control
-0.7
+0.1
-0.5
-0.1
-0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.4
+0.1
-0.6
+0.0
-0.0
no stress control
no stress control
-1.0
+0.2
-0.1
-0.2
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.3
-0.1
-0.3
-0.1
-0.0
pH
R2A_PIPES pH 4
-0.9
+0.1
-0.2
-0.7
+1.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.3
+0.0
-0.6
+0.3
-0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.5
+0.4
-0.5
+0.1
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.4
+0.2
-0.3
-0.1
-0.0
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.5
-0.2
-0.5
-0.1
-0.1
pH
R2A_PIPES pH 4.25
-0.1
+0.2
-0.2
-0.4
+0.2
no stress control
no stress control
-0.0
+0.4
-0.3
-0.1
-0.1
pH
R2A_PIPES pH 4.5
-0.4
-0.0
-0.1
+0.3
+0.0
no stress control
no stress control
-0.2
+0.1
-0.0
-0.0
-0.0
no stress control
no stress control
-0.1
+0.3
-0.2
+0.0
-0.2
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.2
+0.2
-0.1
-0.1
-0.0
pH
R2A_PIPES pH 4.5
-0.2
+0.2
-0.0
-0.1
-0.0
pH
R2A_PIPES pH 4.25
-0.4
+0.1
-0.1
+0.2
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.2
+0.2
-0.2
+0.1
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.2
-0.2
-0.1
-0.1
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.2
+0.2
-0.2
+0.2
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
+0.1
-0.2
+0.2
+0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.2
+0.3
-0.3
+0.0
+0.0
no stress control
no stress control
+0.1
+0.1
-0.1
+0.1
+0.1
no stress control
no stress control
+0.5
-0.1
-0.3
+0.0
+0.2
no stress control
no stress control
+0.2
+0.2
-0.2
+0.2
-0.0
no stress control
no stress control
+0.2
+0.4
-0.3
+0.1
+0.2
pH
R2A_PIPES pH 4
-0.5
+0.1
+0.1
-0.1
+1.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
+0.3
-0.2
+0.2
+0.0
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