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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_03280 and yciW are separated by 34 nucleotides
yciW and OKGIIK_03290 are separated by 131 nucleotides
OKGIIK_03290 and OKGIIK_03295 overlap by 35 nucleotides
OKGIIK_03295 and minE are separated by 91 nucleotides
OKGIIK_03280: OKGIIK_03280 - Carboxyvinyl-carboxyphosphonate phosphorylmutase, at 740,327 to 741,166
_03280
OKGIIK_03285: yciW - carboxymuconolactone decarboxylase, at 741,201 to 741,662
yciW
OKGIIK_03290: OKGIIK_03290 - Cation transport regulator, at 741,794 to 742,072
_03290
OKGIIK_03295: OKGIIK_03295 - hypothetical protein, at 742,038 to 742,541
_03295
OKGIIK_03300: minE - cell division topological specificity factor MinE, at 742,633 to 742,929
minE
Group
Condition
OKGIIK
_03280
OKGIIK
_03285
OKGIIK
_03290
OKGIIK
_03295
OKGIIK
_03300
yciW
minE
no stress control
no stress control
+0.3
+0.4
-0.5
-1.4
N.D.
no stress control
no stress control
-0.1
-0.0
+0.2
-0.7
N.D.
pH
R2A_PIPES pH 4.25
-0.0
+0.1
+0.3
-0.8
N.D.
pH
R2A_PIPES pH 4
+0.2
-0.1
+0.3
-0.8
N.D.
no stress control
no stress control
-0.1
+0.2
-0.0
-0.3
N.D.
no stress control
no stress control
-0.5
+0.1
+0.3
-0.1
N.D.
no stress control
no stress control
+0.1
+0.2
+0.1
-0.6
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.3
-0.0
+0.4
-0.7
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.6
+0.0
+0.2
+0.2
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.2
-0.1
-0.2
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
+0.1
+0.1
+0.1
N.D.
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.3
-0.2
+0.2
+0.6
N.D.
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.1
+0.2
+0.3
-0.2
N.D.
no stress control
no stress control
-0.1
-0.0
+0.1
+0.3
N.D.
no stress control
no stress control
+0.1
+0.1
+0.2
+0.0
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.3
+0.1
-0.0
+0.2
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.6
+0.1
-0.2
+0.1
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
+0.0
+0.2
+0.4
N.D.
pH
R2A_PIPES pH 4.25
+0.1
+0.1
+0.3
+0.2
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.0
-0.1
+0.1
+0.8
N.D.
no stress control
no stress control
+0.4
+0.1
-0.0
+0.3
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.4
+0.1
-0.0
+0.6
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.4
+0.3
+0.2
+0.2
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.3
+0.2
+0.3
+0.2
N.D.
no stress control
no stress control
+0.1
+0.0
+0.2
+0.7
N.D.
pH
R2A_PIPES pH 4
+0.0
-0.1
+0.3
+0.9
N.D.
pH
R2A_PIPES pH 4.5
+0.1
+0.1
+0.4
+0.6
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.0
+0.2
+0.1
+0.9
N.D.
pH
R2A_PIPES pH 4.5
+0.3
+0.0
+0.4
+0.7
N.D.
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