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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
purK and sodA are separated by 50 nucleotides
sodA and grxD are separated by 115 nucleotides
grxD and yqjQ overlap by 4 nucleotides
yqjQ and marC are separated by 54 nucleotides
OKGIIK_03050: purK - 5-(carboxyamino)imidazole ribonucleotide synthase, at 692,733 to 693,923
purK
OKGIIK_03055: sodA - superoxide dismutase [Fe], at 693,974 to 694,552
sodA
OKGIIK_03060: grxD - Grx4 family monothiol glutaredoxin, at 694,668 to 694,991
grxD
OKGIIK_03065: yqjQ - Short-chain dehydrogenase, at 694,988 to 695,758
yqjQ
OKGIIK_03070: marC - YhgN family NAAT transporter, at 695,813 to 696,424
marC
Group
Condition
OKGIIK
_03050
OKGIIK
_03055
OKGIIK
_03060
OKGIIK
_03065
OKGIIK
_03070
purK
sodA
grxD
yqjQ
marC
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
N.D.
N.D.
-1.6
-1.7
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
N.D.
N.D.
-1.6
-1.5
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
N.D.
-2.1
-0.7
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
N.D.
N.D.
-1.5
-0.9
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
N.D.
N.D.
-0.7
-1.3
pH
R2A_PIPES pH 4.5
N.D.
N.D.
N.D.
-1.6
-0.3
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
N.D.
N.D.
-1.1
-0.7
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
N.D.
N.D.
-1.5
-0.3
no stress control
no stress control
N.D.
N.D.
N.D.
-0.6
-1.2
no stress control
no stress control
N.D.
N.D.
N.D.
-1.1
-0.6
no stress control
no stress control
N.D.
N.D.
N.D.
-1.0
-0.6
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
N.D.
N.D.
-1.0
-0.6
no stress control
no stress control
N.D.
N.D.
N.D.
-0.8
-0.7
no stress control
no stress control
N.D.
N.D.
N.D.
-1.2
-0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
N.D.
-0.8
-0.6
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
N.D.
N.D.
-0.6
-0.8
stress
R2A_PIPES with Nickel (II) chloride 424 uM
N.D.
N.D.
N.D.
-0.8
-0.5
no stress control
no stress control
N.D.
N.D.
N.D.
-0.5
-0.8
pH
R2A_PIPES pH 4.5
N.D.
N.D.
N.D.
-0.9
-0.3
stress
R2A_PIPES with Cadmium chloride 128 uM
N.D.
N.D.
N.D.
-0.5
-0.6
no stress control
no stress control
N.D.
N.D.
N.D.
-0.8
-0.4
no stress control
no stress control
N.D.
N.D.
N.D.
-0.5
-0.5
pH
R2A_PIPES pH 4.25
N.D.
N.D.
N.D.
-0.5
-0.3
pH
R2A_PIPES pH 4
N.D.
N.D.
N.D.
-0.6
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
N.D.
-0.5
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
N.D.
-0.3
-0.5
pH
R2A_PIPES pH 4
N.D.
N.D.
N.D.
-0.9
+0.2
no stress control
no stress control
N.D.
N.D.
N.D.
+0.1
-0.7
pH
R2A_PIPES pH 4.25
N.D.
N.D.
N.D.
-0.3
-0.1
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