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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_02985 and miaB are separated by 146 nucleotides
miaB and OKGIIK_02995 are separated by 228 nucleotides
OKGIIK_02995 and degQ are separated by 4 nucleotides
degQ and petA are separated by 163 nucleotides
OKGIIK_02985: OKGIIK_02985 - ABC transporter, at 679,026 to 680,135
_02985
OKGIIK_02990: miaB - tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB, at 680,282 to 681,673
miaB
OKGIIK_02995: OKGIIK_02995 - Lytic transglycosylase, at 681,902 to 683,041
_02995
OKGIIK_03000: degQ - peptidase S1, at 683,046 to 684,215
degQ
OKGIIK_03005: petA - ubiquinol-cytochrome c reductase iron-sulfur subunit, at 684,379 to 684,984
petA
Group
Condition
OKGIIK
_02985
OKGIIK
_02990
OKGIIK
_02995
OKGIIK
_03000
OKGIIK
_03005
miaB
degQ
petA
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.0
-0.3
-0.1
-3.8
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.0
-0.3
-0.4
-3.3
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.0
-0.0
-0.3
-3.6
N.D.
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.2
-0.2
-0.1
-3.1
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.2
-0.2
-0.0
-3.4
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
-0.2
-0.0
-3.1
N.D.
no stress control
no stress control
+0.1
-0.2
-0.0
-2.9
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.2
+0.1
-3.0
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.0
-0.1
-0.1
-2.8
N.D.
no stress control
no stress control
-0.1
-0.3
+0.0
-2.6
N.D.
no stress control
no stress control
-0.1
-0.1
-0.1
-2.6
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.0
-0.2
-0.0
-2.8
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.0
-0.1
-0.0
-2.7
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.3
-0.1
+0.0
-2.4
N.D.
no stress control
no stress control
+0.0
-0.1
+0.0
-2.6
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.0
-0.2
+0.1
-2.5
N.D.
no stress control
no stress control
+0.1
-0.3
-0.1
-2.3
N.D.
no stress control
no stress control
-0.2
+0.2
-0.3
-2.3
N.D.
no stress control
no stress control
+0.0
-0.2
-0.2
-2.1
N.D.
no stress control
no stress control
+0.2
-0.1
-0.2
-2.4
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
-0.3
-0.1
-2.1
N.D.
no stress control
no stress control
+0.1
-0.1
-0.2
-2.2
N.D.
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.2
-0.2
-0.1
-1.2
N.D.
pH
R2A_PIPES pH 4.25
+0.2
-0.2
+0.0
-1.0
N.D.
pH
R2A_PIPES pH 4.25
+0.0
+0.0
-0.2
-0.8
N.D.
pH
R2A_PIPES pH 4
+0.0
-0.4
-0.0
-0.4
N.D.
pH
R2A_PIPES pH 4.5
+0.1
-0.0
-0.2
-0.7
N.D.
pH
R2A_PIPES pH 4.5
-0.2
-0.1
+0.1
-0.4
N.D.
pH
R2A_PIPES pH 4
+0.1
-0.0
+0.2
-0.6
N.D.
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