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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_02975 and OKGIIK_02980 overlap by 4 nucleotides
OKGIIK_02980 and OKGIIK_02985 overlap by 4 nucleotides
OKGIIK_02985 and miaB are separated by 146 nucleotides
miaB and OKGIIK_02995 are separated by 228 nucleotides
OKGIIK_02975: OKGIIK_02975 - Hemolysin secretion protein D, at 677,102 to 678,073
_02975
OKGIIK_02980: OKGIIK_02980 - ABC transporter ATP-binding protein, at 678,070 to 679,029
_02980
OKGIIK_02985: OKGIIK_02985 - ABC transporter, at 679,026 to 680,135
_02985
OKGIIK_02990: miaB - tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB, at 680,282 to 681,673
miaB
OKGIIK_02995: OKGIIK_02995 - Lytic transglycosylase, at 681,902 to 683,041
_02995
Group
Condition
OKGIIK
_02975
OKGIIK
_02980
OKGIIK
_02985
OKGIIK
_02990
OKGIIK
_02995
miaB
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.1
-0.7
-0.2
-0.2
-0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.1
-0.2
-0.0
-0.3
-0.4
no stress control
no stress control
-0.0
-0.3
+0.0
-0.2
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.0
-0.2
+0.0
-0.3
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.4
+0.1
-0.2
+0.1
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.2
-0.0
-0.2
-0.2
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.0
-0.0
-0.3
-0.1
+0.0
no stress control
no stress control
+0.0
+0.1
-0.1
-0.1
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.0
-0.0
+0.0
-0.2
-0.0
no stress control
no stress control
+0.1
-0.1
+0.1
-0.1
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
+0.0
+0.2
-0.2
-0.0
pH
R2A_PIPES pH 4.5
+0.1
-0.1
-0.2
-0.1
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.2
-0.1
-0.0
-0.1
-0.1
no stress control
no stress control
+0.2
+0.1
-0.1
-0.3
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.3
+0.0
-0.0
-0.0
-0.3
pH
R2A_PIPES pH 4.25
-0.0
+0.1
+0.0
+0.0
-0.2
pH
R2A_PIPES pH 4.5
+0.1
+0.0
+0.1
-0.0
-0.2
no stress control
no stress control
+0.0
+0.2
+0.1
-0.2
-0.0
pH
R2A_PIPES pH 4
+0.2
+0.3
+0.0
-0.4
-0.0
pH
R2A_PIPES pH 4.25
+0.1
+0.0
+0.2
-0.2
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
+0.1
+0.1
-0.2
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.3
+0.2
+0.0
-0.3
-0.1
no stress control
no stress control
+0.0
+0.2
+0.0
-0.1
+0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.0
+0.3
+0.0
-0.2
+0.1
no stress control
no stress control
+0.3
+0.2
-0.2
+0.2
-0.3
no stress control
no stress control
+0.1
+0.3
+0.2
-0.1
-0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.3
+0.1
+0.0
-0.1
-0.0
no stress control
no stress control
+0.2
+0.4
+0.1
-0.3
-0.1
pH
R2A_PIPES pH 4
-0.0
+0.8
+0.1
-0.0
+0.2
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