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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_02875 and OKGIIK_02880 are separated by 160 nucleotides
OKGIIK_02880 and ompR are separated by 13 nucleotides
ompR and OKGIIK_02890 are separated by 17 nucleotides
OKGIIK_02890 and OKGIIK_02895 are separated by 118 nucleotides
OKGIIK_02875: OKGIIK_02875 - Flg-hook domain-containing protein, at 659,264 to 660,406
_02875
OKGIIK_02880: OKGIIK_02880 - STAS domain-containing protein, at 660,567 to 660,926
_02880
OKGIIK_02885: ompR - response regulator, at 660,940 to 661,302
ompR
OKGIIK_02890: OKGIIK_02890 - Histidine kinase, at 661,320 to 663,293
_02890
OKGIIK_02895: OKGIIK_02895 - Chemotaxis protein CheW, at 663,412 to 663,939
_02895
Group
Condition
OKGIIK
_02875
OKGIIK
_02880
OKGIIK
_02885
OKGIIK
_02890
OKGIIK
_02895
ompR
no stress control
no stress control
-0.9
N.D.
+0.0
+0.2
-0.3
stress
R2A_PIPES with Cobalt chloride 1024 uM
-1.4
N.D.
+0.2
+0.4
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
N.D.
-0.1
-0.3
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.7
N.D.
+0.2
-0.4
+0.2
no stress control
no stress control
-1.1
N.D.
+0.0
+0.3
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
-1.1
N.D.
+0.2
+0.2
+0.2
no stress control
no stress control
-0.9
N.D.
+0.2
+0.3
-0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.6
N.D.
+0.4
+0.1
+0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-1.1
N.D.
+0.2
+0.4
+0.5
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.7
N.D.
+0.4
+0.1
+0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.5
N.D.
+0.0
+0.2
+0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.2
N.D.
+0.1
+0.1
+0.2
pH
R2A_PIPES pH 4.5
-0.3
N.D.
-0.0
+0.3
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.2
N.D.
-0.0
+0.2
+0.2
no stress control
no stress control
-0.2
N.D.
+0.1
+0.1
+0.2
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.3
N.D.
+0.2
+0.2
-0.4
no stress control
no stress control
-0.2
N.D.
+0.4
+0.1
+0.1
pH
R2A_PIPES pH 4.5
-0.3
N.D.
+0.4
+0.1
+0.2
no stress control
no stress control
-0.0
N.D.
+0.2
+0.3
+0.0
no stress control
no stress control
-0.3
N.D.
+0.4
+0.2
+0.2
pH
R2A_PIPES pH 4
+0.4
N.D.
+0.1
-0.2
+0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.5
N.D.
+0.1
-0.0
+0.0
pH
R2A_PIPES pH 4.25
-0.4
N.D.
+0.4
+0.2
+0.3
no stress control
no stress control
-0.4
N.D.
+0.5
+0.2
+0.3
pH
R2A_PIPES pH 4.25
-0.0
N.D.
+0.4
+0.1
+0.3
pH
R2A_PIPES pH 4
+0.5
N.D.
+0.3
+0.1
+0.1
no stress control
no stress control
+0.8
N.D.
+0.2
+0.2
+0.2
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+1.1
N.D.
-0.2
+0.6
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.9
N.D.
+0.4
+0.3
+0.3
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