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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
fliM and fliN overlap by 4 nucleotides
fliN and fliO are separated by 137 nucleotides
fliO and fliP overlap by 4 nucleotides
fliP and fliQ are separated by 763 nucleotides
OKGIIK_02780: fliM - flagellar motor switch protein FliM, at 642,253 to 643,269
fliM
OKGIIK_02785: fliN - flagellar motor switch protein FliN, at 643,266 to 643,613
fliN
OKGIIK_02790: fliO - flagellar biosynthetic protein FliO, at 643,751 to 644,119
fliO
OKGIIK_02795: fliP - flagellar type III secretion system pore protein FliP, at 644,116 to 644,862
fliP
OKGIIK_02800: fliQ - flagellar biosynthesis protein FliQ, at 645,626 to 645,895
fliQ
Group
Condition
OKGIIK
_02780
OKGIIK
_02785
OKGIIK
_02790
OKGIIK
_02795
OKGIIK
_02800
fliM
fliN
fliO
fliP
fliQ
no stress control
no stress control
+0.1
N.D.
-0.7
-0.8
-0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-1.2
N.D.
-0.2
+0.1
-0.2
no stress control
no stress control
-0.3
N.D.
-0.8
-0.0
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.4
N.D.
+0.1
-0.4
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.5
N.D.
-1.2
+0.6
-0.3
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
N.D.
-0.1
-0.1
-0.2
no stress control
no stress control
+0.0
N.D.
-0.2
+0.2
-0.3
pH
R2A_PIPES pH 4.5
+0.3
N.D.
-0.7
+0.4
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.2
N.D.
+0.1
-0.2
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
N.D.
+0.1
+0.1
+0.1
no stress control
no stress control
+0.3
N.D.
-0.4
+0.2
-0.0
no stress control
no stress control
+0.0
N.D.
+0.2
+0.1
-0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.1
N.D.
+0.1
+0.3
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.3
N.D.
+0.1
-0.1
+0.1
pH
R2A_PIPES pH 4.5
+0.3
N.D.
+0.7
-0.6
-0.1
no stress control
no stress control
-0.2
N.D.
+0.5
+0.3
-0.2
no stress control
no stress control
+0.2
N.D.
+0.5
-0.2
-0.0
pH
R2A_PIPES pH 4.25
+0.3
N.D.
+0.0
+0.1
+0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.2
N.D.
+0.4
+0.2
+0.1
pH
R2A_PIPES pH 4.25
+0.1
N.D.
+0.3
+0.2
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.5
N.D.
+0.5
-0.0
-0.3
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.1
N.D.
+0.1
+0.3
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.5
N.D.
+0.6
-0.3
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.5
N.D.
+0.0
+0.2
+0.3
no stress control
no stress control
+0.5
N.D.
+0.4
+0.4
+0.1
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.4
N.D.
+1.2
+0.4
+0.1
pH
R2A_PIPES pH 4
-0.1
N.D.
+2.2
+0.2
-0.4
no stress control
no stress control
+0.9
N.D.
+1.4
-0.1
+0.0
pH
R2A_PIPES pH 4
+0.5
N.D.
+3.3
+0.2
+0.1
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