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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_02615 and OKGIIK_02620 are separated by 42 nucleotides
OKGIIK_02620 and OKGIIK_02625 are separated by 108 nucleotides
OKGIIK_02625 and flgM overlap by 4 nucleotides
flgM and flgA are separated by 109 nucleotides
OKGIIK_02615: OKGIIK_02615 - Transmembrane protein 43, at 610,638 to 611,672
_02615
OKGIIK_02620: OKGIIK_02620 - Diguanylate phosphodiesterase, at 611,715 to 613,007
_02620
OKGIIK_02625: OKGIIK_02625 - Flagellar biosynthesis protein FlgN, at 613,116 to 613,562
_02625
OKGIIK_02630: flgM - flagellar biosynthesis anti-sigma factor FlgM, at 613,559 to 613,882
flgM
OKGIIK_02635: flgA - flagellar basal body P-ring formation protein FlgA, at 613,992 to 614,699
flgA
Group
Condition
OKGIIK
_02615
OKGIIK
_02620
OKGIIK
_02625
OKGIIK
_02630
OKGIIK
_02635
flgM
flgA
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.1
+0.1
-1.0
N.D.
-0.2
no stress control
no stress control
+0.3
+0.1
+0.6
N.D.
-2.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
+0.1
-1.5
N.D.
+0.6
pH
R2A_PIPES pH 4.25
-0.1
+0.1
-0.4
N.D.
-0.4
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.1
-0.3
-0.5
N.D.
+0.3
no stress control
no stress control
+0.1
-0.1
-0.8
N.D.
+0.3
pH
R2A_PIPES pH 4.5
+0.3
+0.1
-0.5
N.D.
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.0
-0.3
N.D.
-0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
+0.2
-0.4
N.D.
-0.0
no stress control
no stress control
+0.0
-0.0
-0.2
N.D.
-0.1
no stress control
no stress control
-0.1
-0.1
-0.2
N.D.
+0.3
pH
R2A_PIPES pH 4
+0.1
+0.1
-0.4
N.D.
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.2
-0.5
+0.2
N.D.
+0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.2
+0.1
-0.0
N.D.
+0.1
pH
R2A_PIPES pH 4
+0.2
-0.0
+0.4
N.D.
-0.5
pH
R2A_PIPES pH 4.5
-0.1
-0.0
-0.0
N.D.
+0.2
pH
R2A_PIPES pH 4.25
+0.0
+0.0
-0.2
N.D.
+0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
+0.0
+0.4
N.D.
+0.0
no stress control
no stress control
-0.4
-0.1
-0.1
N.D.
+0.9
no stress control
no stress control
-0.1
+0.1
-0.3
N.D.
+0.6
no stress control
no stress control
-0.0
-0.1
-0.1
N.D.
+0.6
no stress control
no stress control
+0.1
+0.1
-0.1
N.D.
+0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.3
+0.1
-0.1
N.D.
+0.5
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.0
+0.7
N.D.
+0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
+0.0
+0.5
N.D.
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
-0.0
+0.3
N.D.
+0.7
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.0
-0.2
+0.7
N.D.
+0.5
no stress control
no stress control
-0.0
+0.2
+0.8
N.D.
+0.5
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.3
+0.3
-0.3
N.D.
+1.3
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