Fitness for 5 genes in Rhodanobacter sp. FW510-T8

Add gene:

Number of genes on each side:  

Top 29 experiments (either direction), sorted by average fitness

Or view all 29 experiments or choose conditions or try the comparative fitness browser

500 ntOKGIIK_02550 and Phe_trna are separated by 467 nucleotidesPhe_trna and yggX are separated by 81 nucleotidesyggX and mutY are separated by 100 nucleotidesmutY and OKGIIK_02570 overlap by 4 nucleotides OKGIIK_02550: OKGIIK_02550 - AAA family ATPase, at 600,139 to 601,485 _02550 OKGIIK_02555: Phe_trna - tRNA-Phe, at 601,953 to 602,028 _trna OKGIIK_02560: yggX - oxidative damage protection protein, at 602,110 to 602,388 yggX OKGIIK_02565: mutY - A/G-specific adenine glycosylase, at 602,489 to 603,541 mutY OKGIIK_02570: OKGIIK_02570 - Membrane assembly protein AsmA, at 603,538 to 604,596 _02570
Group Condition OKGIIK_02550 OKGIIK_02555 OKGIIK_02560 OKGIIK_02565 OKGIIK_02570
Phe_trna yggX mutY
pH R2A_PIPES pH 4.5 -0.3 N.D. -0.5 -0.1 -0.4
no stress control no stress control -0.4 N.D. -0.7 -0.0 +0.0
no stress control no stress control -0.3 N.D. -0.7 +0.1 -0.1
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x -0.2 N.D. -0.6 -0.2 -0.0
stress R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x -0.1 N.D. -0.5 -0.0 -0.3
pH R2A_PIPES pH 4 +0.0 N.D. -0.6 -0.0 -0.4
stress R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x -0.2 N.D. -0.3 -0.1 -0.2
no stress control no stress control -0.1 N.D. -0.2 -0.1 -0.2
no stress control no stress control -0.2 N.D. -0.4 -0.0 +0.0
no stress control no stress control -0.2 N.D. -0.2 +0.0 -0.2
stress R2A_PIPES with Cobalt chloride 1024 uM -0.2 N.D. -0.3 -0.1 +0.1
pH R2A_PIPES pH 4.25 -0.1 N.D. -0.5 +0.0 +0.2
no stress control no stress control -0.2 N.D. -0.4 +0.1 +0.1
pH R2A_PIPES pH 4 -0.2 N.D. -0.5 +0.2 +0.0
no stress control no stress control -0.1 N.D. -0.3 +0.0 +0.1
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x -0.2 N.D. -0.3 -0.0 +0.2
no stress control no stress control -0.2 N.D. -0.1 -0.0 -0.0
stress R2A_PIPES with Aluminum chloride 0.28125 mM -0.2 N.D. -0.3 +0.0 +0.1
stress R2A_PIPES with Cadmium chloride 128 uM +0.1 N.D. -0.6 -0.2 +0.5
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.2 N.D. -0.3 +0.1 +0.3
stress R2A_PIPES with Cobalt chloride 512 uM -0.3 N.D. -0.1 +0.1 +0.1
pH R2A_PIPES pH 4.25 -0.2 N.D. -0.2 +0.0 +0.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.2 N.D. -0.0 -0.1 +0.2
stress R2A_PIPES with Nickel (II) chloride 424 uM -0.2 N.D. -0.2 -0.0 +0.4
pH R2A_PIPES pH 4.5 -0.0 N.D. +0.1 -0.0 -0.0
stress R2A_PIPES with Cobalt chloride 1024 uM -0.4 N.D. +0.3 +0.1 -0.1
no stress control no stress control -0.2 N.D. -0.0 +0.2 +0.1
stress R2A_PIPES with Cobalt chloride 512 uM -0.2 N.D. +0.3 -0.0 +0.2
stress R2A_PIPES with Aluminum chloride 0.28125 mM -0.1 N.D. +0.1 +0.1 +0.1
remove
OKGIIK_02550
plot		 remove
OKGIIK_02555
plot		 remove
OKGIIK_02560		 remove
OKGIIK_02565
plot		 remove
OKGIIK_02570
plot