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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
dinG and dmeF are separated by 197 nucleotides
dmeF and OKGIIK_02205 are separated by 55 nucleotides
OKGIIK_02205 and lepB are separated by 238 nucleotides
lepB and creD are separated by 178 nucleotides
OKGIIK_02195: dinG - helicase, at 516,292 to 518,250
dinG
OKGIIK_02200: dmeF - CDF family Co(II)/Ni(II) efflux transporter DmeF, at 518,448 to 519,374
dmeF
OKGIIK_02205: OKGIIK_02205 - Metal-sensitive transcriptional repressor, at 519,430 to 519,699
_02205
OKGIIK_02210: lepB - signal peptidase I, at 519,938 to 520,612
lepB
OKGIIK_02215: creD - cell envelope integrity protein CreD, at 520,791 to 522,140
creD
Group
Condition
OKGIIK
_02195
OKGIIK
_02200
OKGIIK
_02205
OKGIIK
_02210
OKGIIK
_02215
dinG
dmeF
lepB
creD
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.0
-2.1
N.D.
-0.2
-0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
-2.1
N.D.
-0.1
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.0
-1.7
N.D.
-0.1
+0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.2
-1.5
N.D.
-0.3
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.2
-1.2
N.D.
+0.2
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.1
N.D.
-0.4
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.3
-0.8
N.D.
-0.0
+0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.0
-0.2
N.D.
-0.1
-0.1
no stress control
no stress control
+0.1
-0.3
N.D.
+0.1
-0.1
no stress control
no stress control
-0.2
+0.0
N.D.
-0.1
-0.0
pH
R2A_PIPES pH 4.5
-0.1
-0.1
N.D.
-0.1
+0.1
no stress control
no stress control
-0.0
-0.1
N.D.
-0.2
+0.1
pH
R2A_PIPES pH 4.5
+0.0
-0.1
N.D.
-0.1
-0.0
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.1
+0.1
N.D.
-0.0
-0.1
pH
R2A_PIPES pH 4.25
-0.0
-0.0
N.D.
+0.0
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.1
+0.0
N.D.
-0.1
+0.1
pH
R2A_PIPES pH 4.25
+0.0
-0.1
N.D.
+0.0
+0.1
no stress control
no stress control
+0.1
-0.1
N.D.
-0.1
+0.2
pH
R2A_PIPES pH 4
+0.0
+0.1
N.D.
-0.1
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
-0.0
N.D.
+0.0
-0.0
pH
R2A_PIPES pH 4
-0.1
-0.1
N.D.
+0.3
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
+0.2
N.D.
-0.1
+0.1
no stress control
no stress control
+0.4
-0.0
N.D.
+0.0
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.4
+0.2
N.D.
-0.3
+0.1
no stress control
no stress control
+0.1
+0.0
N.D.
+0.1
+0.1
no stress control
no stress control
+0.1
-0.1
N.D.
+0.3
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
+0.3
N.D.
+0.1
-0.0
no stress control
no stress control
+0.1
+0.1
N.D.
+0.3
-0.1
no stress control
no stress control
+0.1
+0.0
N.D.
+0.2
+0.1
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