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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
scw11 and dps are separated by 207 nucleotides
dps and hrpA are separated by 141 nucleotides
hrpA and OKGIIK_02160 are separated by 9 nucleotides
OKGIIK_02160 and OKGIIK_02165 are separated by 99 nucleotides
OKGIIK_02145: scw11 - benzoate transporter, at 499,471 to 502,071
scw11
OKGIIK_02150: dps - DNA-binding ferritin-like protein (oxidative damage protectant), at 502,279 to 502,746
dps
OKGIIK_02155: hrpA - ATP-dependent RNA helicase HrpA, at 502,888 to 507,129
hrpA
OKGIIK_02160: OKGIIK_02160 - hypothetical protein, at 507,139 to 507,618
_02160
OKGIIK_02165: OKGIIK_02165 - hypothetical protein, at 507,718 to 508,266
_02165
Group
Condition
OKGIIK
_02145
OKGIIK
_02150
OKGIIK
_02155
OKGIIK
_02160
OKGIIK
_02165
scw11
dps
hrpA
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.7
+0.1
-0.9
-0.0
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.3
+0.1
-0.9
-0.2
N.D.
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.1
-0.2
-0.1
-0.3
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.3
+0.1
-0.6
+0.1
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.2
+0.2
-0.5
+0.0
N.D.
no stress control
no stress control
-0.2
+0.0
+0.0
-0.2
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.3
+0.0
-0.1
+0.1
N.D.
no stress control
no stress control
-0.1
+0.0
+0.1
-0.2
N.D.
no stress control
no stress control
-0.3
+0.4
-0.1
-0.1
N.D.
no stress control
no stress control
-0.3
+0.2
-0.1
+0.0
N.D.
no stress control
no stress control
-0.3
+0.2
-0.1
+0.1
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
+0.1
-0.1
+0.0
N.D.
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.1
+0.0
+0.1
-0.0
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.0
-0.0
-0.1
+0.1
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
+0.0
+0.1
-0.1
N.D.
no stress control
no stress control
-0.2
-0.0
-0.0
+0.2
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
+0.2
+0.1
-0.1
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.1
+0.0
+0.1
+0.2
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
+0.0
-0.1
+0.1
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
+0.2
+0.1
-0.2
N.D.
pH
R2A_PIPES pH 4.5
+0.3
-0.2
+0.1
+0.1
N.D.
no stress control
no stress control
-0.1
+0.1
+0.1
+0.1
N.D.
no stress control
no stress control
-0.4
+0.5
+0.3
-0.1
N.D.
no stress control
no stress control
-0.0
+0.2
+0.1
+0.2
N.D.
pH
R2A_PIPES pH 4.5
+0.3
+0.0
+0.1
+0.1
N.D.
pH
R2A_PIPES pH 4.25
+0.7
+0.1
+0.1
+0.2
N.D.
pH
R2A_PIPES pH 4.25
+0.7
+0.2
+0.0
+0.3
N.D.
pH
R2A_PIPES pH 4
+3.1
-0.1
+0.2
-0.1
N.D.
pH
R2A_PIPES pH 4
+3.0
+0.2
+0.1
+0.5
N.D.
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