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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_02100 and OKGIIK_02105 are separated by 52 nucleotides
OKGIIK_02105 and OKGIIK_02110 are separated by 74 nucleotides
OKGIIK_02110 and ttdA are separated by 177 nucleotides
ttdA and lysA are separated by 407 nucleotides
OKGIIK_02100: OKGIIK_02100 - (2Fe-2S)-binding protein, at 488,199 to 488,735
_02100
OKGIIK_02105: OKGIIK_02105 - amino acid permease, at 488,788 to 490,113
_02105
OKGIIK_02110: OKGIIK_02110 - Phenazine biosynthesis protein PhzF, at 490,188 to 491,069
_02110
OKGIIK_02115: ttdA - fumarate hydratase, at 491,247 to 492,764
ttdA
OKGIIK_02120: lysA - bifunctional aspartate kinase/diaminopimelate decarboxylase, at 493,172 to 495,733
lysA
Group
Condition
OKGIIK
_02100
OKGIIK
_02105
OKGIIK
_02110
OKGIIK
_02115
OKGIIK
_02120
ttdA
lysA
stress
R2A_PIPES with Cobalt chloride 1024 uM
-1.0
+0.0
N.D.
-2.2
-0.1
no stress control
no stress control
-1.1
+0.0
N.D.
-1.2
-0.4
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.9
+0.1
N.D.
-0.9
-0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.6
+0.1
N.D.
-0.9
-0.2
no stress control
no stress control
-0.5
+0.0
N.D.
-0.9
-0.2
no stress control
no stress control
-0.0
+0.2
N.D.
-1.3
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.2
+0.1
N.D.
-0.9
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.3
+0.0
N.D.
-0.7
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.2
+0.0
N.D.
-0.6
+0.0
pH
R2A_PIPES pH 4.5
+0.1
+0.1
N.D.
-0.1
-0.9
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.5
-0.0
N.D.
-0.1
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.4
+0.2
N.D.
-0.3
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.3
+0.0
N.D.
-0.2
-0.1
no stress control
no stress control
-0.1
+0.1
N.D.
-0.4
-0.1
no stress control
no stress control
-0.1
+0.1
N.D.
-0.5
-0.0
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.2
+0.2
N.D.
-0.3
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.1
N.D.
-0.1
-0.1
pH
R2A_PIPES pH 4.25
+0.7
+0.2
N.D.
-0.3
-0.9
no stress control
no stress control
-0.2
+0.0
N.D.
+0.0
-0.1
no stress control
no stress control
-0.0
+0.1
N.D.
-0.2
-0.1
no stress control
no stress control
+0.8
+0.1
N.D.
-0.8
-0.2
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.0
+0.3
N.D.
-0.2
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.2
N.D.
-0.2
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.4
+0.1
N.D.
-0.2
-0.1
pH
R2A_PIPES pH 4.25
+0.9
+0.2
N.D.
+0.4
-1.2
no stress control
no stress control
+0.5
+0.1
N.D.
-0.1
+0.0
pH
R2A_PIPES pH 4.5
+0.6
+0.3
N.D.
+0.7
-0.5
pH
R2A_PIPES pH 4
+3.1
+0.1
N.D.
+0.1
-1.1
pH
R2A_PIPES pH 4
+3.1
+0.2
N.D.
+0.1
-0.6
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