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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_02010 and OKGIIK_02015 overlap by 8 nucleotides
OKGIIK_02015 and dxs are separated by 279 nucleotides
dxs and mcrA are separated by 103 nucleotides
mcrA and OKGIIK_02030 are separated by 242 nucleotides
OKGIIK_02010: OKGIIK_02010 - hypothetical protein, at 460,176 to 464,327
_02010
OKGIIK_02015: OKGIIK_02015 - Release factor glutamine methyltransferase, at 464,320 to 465,147
_02015
OKGIIK_02020: dxs - 1-deoxy-D-xylulose-5-phosphate synthase, at 465,427 to 467,316
dxs
OKGIIK_02025: mcrA - HNH endonuclease, at 467,420 to 468,031
mcrA
OKGIIK_02030: OKGIIK_02030 - Multidrug transporter, at 468,274 to 469,053
_02030
Group
Condition
OKGIIK
_02010
OKGIIK
_02015
OKGIIK
_02020
OKGIIK
_02025
OKGIIK
_02030
dxs
mcrA
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.2
N.D.
N.D.
-0.2
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
N.D.
N.D.
-0.3
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.0
N.D.
N.D.
-0.2
-0.1
no stress control
no stress control
-0.1
N.D.
N.D.
-0.2
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
N.D.
N.D.
-0.3
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.0
N.D.
N.D.
-0.2
+0.0
no stress control
no stress control
-0.1
N.D.
N.D.
-0.1
-0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.2
N.D.
N.D.
+0.1
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.0
N.D.
N.D.
-0.2
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.1
N.D.
N.D.
-0.0
-0.1
no stress control
no stress control
+0.1
N.D.
N.D.
-0.0
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
N.D.
N.D.
-0.2
+0.2
no stress control
no stress control
+0.0
N.D.
N.D.
+0.0
-0.0
no stress control
no stress control
+0.0
N.D.
N.D.
+0.0
-0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.2
N.D.
N.D.
-0.1
-0.0
pH
R2A_PIPES pH 4.5
+0.2
N.D.
N.D.
-0.2
+0.1
no stress control
no stress control
+0.2
N.D.
N.D.
+0.1
-0.1
pH
R2A_PIPES pH 4.25
+0.2
N.D.
N.D.
+0.0
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
N.D.
N.D.
-0.0
+0.1
pH
R2A_PIPES pH 4.25
+0.3
N.D.
N.D.
-0.1
+0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.2
N.D.
N.D.
-0.0
-0.0
pH
R2A_PIPES pH 4
+0.1
N.D.
N.D.
-0.0
+0.0
no stress control
no stress control
-0.0
N.D.
N.D.
+0.1
+0.2
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.3
N.D.
N.D.
-0.0
+0.0
no stress control
no stress control
-0.0
N.D.
N.D.
+0.2
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.0
N.D.
N.D.
+0.1
+0.3
no stress control
no stress control
+0.6
N.D.
N.D.
+0.1
-0.2
pH
R2A_PIPES pH 4
-0.1
N.D.
N.D.
+0.4
+0.1
pH
R2A_PIPES pH 4.5
+0.2
N.D.
N.D.
+0.4
-0.0
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