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Cofit
Protein
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Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
purR and OKGIIK_01755 are separated by 7 nucleotides
OKGIIK_01755 and sucC are separated by 310 nucleotides
sucC and sucD are separated by 96 nucleotides
sucD and OKGIIK_01770 are separated by 70 nucleotides
OKGIIK_01750: purR - LacI family transcriptional regulator, at 404,733 to 405,737
purR
OKGIIK_01755: OKGIIK_01755 - Histidine kinase, at 405,745 to 407,394
_01755
OKGIIK_01760: sucC - ADP-forming succinate--CoA ligase subunit beta, at 407,705 to 408,865
sucC
OKGIIK_01765: sucD - succinate--CoA ligase subunit alpha, at 408,962 to 409,837
sucD
OKGIIK_01770: OKGIIK_01770 - Transcriptional regulator ArgP, at 409,908 to 410,813
_01770
Group
Condition
OKGIIK
_01750
OKGIIK
_01755
OKGIIK
_01760
OKGIIK
_01765
OKGIIK
_01770
purR
sucC
sucD
pH
R2A_PIPES pH 4.5
-0.5
-0.1
N.D.
N.D.
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.4
-0.3
N.D.
N.D.
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.7
+0.0
N.D.
N.D.
+0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.2
-0.3
N.D.
N.D.
+0.1
no stress control
no stress control
-0.2
+0.0
N.D.
N.D.
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.0
-0.3
N.D.
N.D.
+0.1
no stress control
no stress control
-0.5
+0.1
N.D.
N.D.
+0.2
pH
R2A_PIPES pH 4.25
-0.2
+0.0
N.D.
N.D.
+0.1
no stress control
no stress control
-0.5
+0.2
N.D.
N.D.
+0.2
no stress control
no stress control
-0.4
+0.1
N.D.
N.D.
+0.2
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.2
+0.1
N.D.
N.D.
+0.2
pH
R2A_PIPES pH 4
-0.3
-0.1
N.D.
N.D.
+0.4
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.1
N.D.
N.D.
+0.4
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.0
N.D.
N.D.
+0.2
no stress control
no stress control
+0.1
-0.1
N.D.
N.D.
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.1
+0.1
N.D.
N.D.
+0.0
no stress control
no stress control
+0.2
+0.0
N.D.
N.D.
+0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.2
+0.1
N.D.
N.D.
+0.3
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.3
+0.0
N.D.
N.D.
+0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.4
-0.2
N.D.
N.D.
+0.1
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.1
-0.0
N.D.
N.D.
+0.3
pH
R2A_PIPES pH 4.25
+0.0
+0.1
N.D.
N.D.
+0.2
no stress control
no stress control
-0.0
+0.1
N.D.
N.D.
+0.3
pH
R2A_PIPES pH 4.5
+0.1
-0.1
N.D.
N.D.
+0.4
no stress control
no stress control
-0.1
+0.2
N.D.
N.D.
+0.3
pH
R2A_PIPES pH 4
+0.3
+0.2
N.D.
N.D.
-0.0
no stress control
no stress control
+0.1
+0.1
N.D.
N.D.
+0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
+0.1
N.D.
N.D.
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.2
-0.0
N.D.
N.D.
+0.4
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