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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_01640 and OKGIIK_01645 overlap by 4 nucleotides
OKGIIK_01645 and OKGIIK_01650 are separated by 63 nucleotides
OKGIIK_01650 and OKGIIK_01655 overlap by 4 nucleotides
OKGIIK_01655 and OKGIIK_01660 are separated by 64 nucleotides
OKGIIK_01640: OKGIIK_01640 - Oxidoreductase, at 370,060 to 371,370
_01640
OKGIIK_01645: OKGIIK_01645 - Dihydrodipicolinate synthase family protein, at 371,367 to 372,272
_01645
OKGIIK_01650: OKGIIK_01650 - Ketoglutarate semialdehyde dehydrogenase, at 372,336 to 373,934
_01650
OKGIIK_01655: OKGIIK_01655 - X-Pro dipeptidase, at 373,931 to 375,133
_01655
OKGIIK_01660: OKGIIK_01660 - DUF885 domain-containing protein, at 375,198 to 377,018
_01660
Group
Condition
OKGIIK
_01640
OKGIIK
_01645
OKGIIK
_01650
OKGIIK
_01655
OKGIIK
_01660
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
-0.1
-1.0
-0.3
-0.1
no stress control
no stress control
-0.4
+0.2
-0.4
-0.3
+0.1
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.3
-0.3
+0.8
-0.8
+0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.1
-0.1
-0.3
+0.3
+0.0
no stress control
no stress control
+1.2
-0.2
-0.4
-0.7
+0.0
no stress control
no stress control
+0.3
-0.2
+0.4
-0.2
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+1.3
-0.0
-0.0
-1.0
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.2
+0.1
+0.3
-0.4
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.7
-0.0
-0.2
-0.1
+0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.4
-0.4
+0.3
+0.0
+0.0
no stress control
no stress control
+0.8
+0.2
-0.3
-0.2
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.7
-0.1
+0.2
-0.0
-0.0
no stress control
no stress control
+0.4
+0.0
+0.4
-0.1
+0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.5
+0.3
+0.0
-0.3
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.6
+0.0
+0.4
-0.1
-0.0
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.5
+0.1
+0.3
-0.0
+0.2
no stress control
no stress control
+0.6
+0.2
+0.2
-0.0
+0.2
pH
R2A_PIPES pH 4.5
+0.7
-0.1
+0.3
+0.0
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.7
+0.2
+0.2
-0.3
+0.3
pH
R2A_PIPES pH 4.5
+0.2
+0.3
+0.6
-0.2
+0.2
no stress control
no stress control
+0.7
+0.2
+0.0
+0.2
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.8
+0.2
+0.4
+0.0
+0.1
no stress control
no stress control
+1.0
+0.3
-0.0
+0.1
+0.2
no stress control
no stress control
+1.1
+0.3
+0.1
+0.0
+0.2
pH
R2A_PIPES pH 4.25
+0.8
+0.2
+0.4
+0.2
+0.2
pH
R2A_PIPES pH 4.25
+0.9
+0.3
+0.5
+0.1
+0.3
stress
R2A_PIPES with Cobalt chloride 1024 uM
+1.2
+0.2
+0.4
+0.2
+0.1
pH
R2A_PIPES pH 4
+0.8
+0.3
+0.9
+0.2
+0.2
pH
R2A_PIPES pH 4
+1.1
+0.5
+0.9
+0.6
+0.3
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